Gene Tcr_1258 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1258 
Symbol 
ID3760550 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1372933 
End bp1373475 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content42% 
IMG OID637785990 
ProductSmr protein/MutS2-like 
Protein accessionYP_391527 
Protein GI78485602 
COG category[S] Function unknown 
COG ID[COG2840] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.798752 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTAATA TTTCAGATGA AGATAAATCC TTATTTGCTG ACGCTGTTCA AGGTGTGAAA 
AAGCTTAATC AAGACAAGAA AGTTGTGCCG CATCAAACTT CATCTCTTAA GCCTAAAGTA
CGTCGACATT CACCATTGAA TGACAAATCG CCTTACGGAC ACTCCGTAGA AACAGCGTCA
TTTTCGCAAG TAACGGCGCA TGAAAGCTTA ACATATCAAC AGCCCAGTGT GCATGCGCAG
GACATGAAGC GTTTAAAAAA CGGTAAATTT CATACCCACT GGCAACTGGA CCTGCATGGC
TACACGGAAG ATCAAGCGGA TAAGATTCTG AAAGATTTTT TAATCGACGC CATACAACAA
CAGGCTCGTT ACCTTATTAT TGTTCATGGA AAAGGCTACA ATTCAAAAAC CGACTTCCCA
GTCCTAAAAA ACCTGGTTAA TCAAAGACTC CCACAAGTTC CACAGGTGCT CGCCTATTGC
AGTGCACAAC CTAAAGATGG CGGTACCGGG GCCGTGTATG TCTTTTTAAA AAAGAAAAGT
TAA
 
Protein sequence
MSNISDEDKS LFADAVQGVK KLNQDKKVVP HQTSSLKPKV RRHSPLNDKS PYGHSVETAS 
FSQVTAHESL TYQQPSVHAQ DMKRLKNGKF HTHWQLDLHG YTEDQADKIL KDFLIDAIQQ
QARYLIIVHG KGYNSKTDFP VLKNLVNQRL PQVPQVLAYC SAQPKDGGTG AVYVFLKKKS