Gene Tcr_1257 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1257 
Symbol 
ID3760549 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1372120 
End bp1372875 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content46% 
IMG OID637785989 
Productstationary-phase survival protein SurE 
Protein accessionYP_391526 
Protein GI78485601 
COG category[R] General function prediction only 
COG ID[COG0496] Predicted acid phosphatase 
TIGRFAM ID[TIGR00087] 5'/3'-nucleotidase SurE 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.188641 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATCT TATTATCCAA TGATGATGGT TATAAAGCCC CGGGGATTCA AGCTTTATGG 
CATTGCTTAA AAGAACTTAA CCTTCACTCC GAGTTGAGGT TGATTGCACC GGATCGAAAC
CGCAGTGCGG CCAGCAACTC TTTGACTTTA ATGGAACCGT TACGGATAAC CGATCATGGT
GATGCCATTT ACAGCGTGAA TGGCACGCCC ACAGATTGCG TTCATTTGGG CATTAATGGT
GCGATGGACT TTCAACCGGA TATGGTGGTT TCTGGCATTA ATGCGGGAGC CAATATGGGC
GACGATGTGC TTTATTCCGG CACGGTCGCG GCCGCAACAG AAGGTCGTTT TCTGGGGAAA
CCCTCCATTG CGATTTCGCT TTGCGGGGAT CAGCATTTTG AAACAGCCAG TCAAGTCATG
TTAGAGCTGT TCAAAAACTT TCACGAACTG CCGTTGGATA GCTCAACTAT TTTAAACATC
AATGTGCCCG ATATTCCTTA TGAATCCTTA AAAGGCATTC AAATCACTCG TTTAGGCAAA
CGACACTGTT CTGAAAAAGT GGTGACCACT CAAGACCCTA GAGGCAATCA AATTTACTGG
GTCGGGCCGG CTGGTCAGGC CGAGGATGCG TCAGAAGGAA CAGACTTTCA TGCGGTAGAA
AACGGTTATG CATCCGTTAC GCCTTTGAAG ATTGACTTGA CTCACTACGA GATGCAAGCC
GTCTTAAAAG GTTGGTTTGA GAATAAAGCT CTATGA
 
Protein sequence
MKILLSNDDG YKAPGIQALW HCLKELNLHS ELRLIAPDRN RSAASNSLTL MEPLRITDHG 
DAIYSVNGTP TDCVHLGING AMDFQPDMVV SGINAGANMG DDVLYSGTVA AATEGRFLGK
PSIAISLCGD QHFETASQVM LELFKNFHEL PLDSSTILNI NVPDIPYESL KGIQITRLGK
RHCSEKVVTT QDPRGNQIYW VGPAGQAEDA SEGTDFHAVE NGYASVTPLK IDLTHYEMQA
VLKGWFENKA L