Gene Tcr_1255 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1255 
Symbol 
ID3760547 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand- 
Start bp1370818 
End bp1371396 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content41% 
IMG OID637785987 
Producthypothetical protein 
Protein accessionYP_391524 
Protein GI78485599 
COG category[S] Function unknown 
COG ID[COG1238] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.0889015 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATTT TTACTGCTCT TTATGATCGA GCATTACTTT GGGCAAAACA CCCTAAAGCC 
ACTAAATATT TAGGAGGGAT GAGTTTTGCA GAAGCCTCTT TTTTCCCTAT TCCCCCCGAC 
GTGATGTTGG CACCGATGAG TTTAGCCCAA CCTAATCGAG CCTATTACTT TGCATGGATT 
GCAACGGTGA CTTCCTTGCT AGGAGGGGTC TTAGGCTATG CCATTGGTTA TTGGCTTTTA 
GACGCCATTT GGCCTATGAT TGAATCATTA AATTACGTTG ATAAATATCA GGCGGTGGAA 
GGTTTTTTTG CAGATTATGG CGTCTGGATT GTATTTTTAG CCGGATTTAG TCCAATTCCT 
TATAAATTAT TTACAATATC AGCCGGTGCG ACAAGCATGG CTATTTTGCC ATTTCTGTTG 
GCTTCCTTTG TAGGAAGAGG GGCACGATTT TTCTTAGTGG CGGCCTTGAT GAAAATTGGC 
GGAGAACGTT ACGAATCCAA GATTCGTCAT TCTGTTGATT GGATTGGTTA TGGTACCATT 
GCTTTAATTG TTTCTTATTT GGCGGTAAAA CAACTGTGA
 
Protein sequence
MKIFTALYDR ALLWAKHPKA TKYLGGMSFA EASFFPIPPD VMLAPMSLAQ PNRAYYFAWI 
ATVTSLLGGV LGYAIGYWLL DAIWPMIESL NYVDKYQAVE GFFADYGVWI VFLAGFSPIP 
YKLFTISAGA TSMAILPFLL ASFVGRGARF FLVAALMKIG GERYESKIRH SVDWIGYGTI 
ALIVSYLAVK QL