Gene Tcr_1253 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1253 
Symbol 
ID3760545 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1369664 
End bp1370044 
Gene Length381 bp 
Protein Length126 aa 
Translation table11 
GC content41% 
IMG OID637785985 
Producthypothetical protein 
Protein accessionYP_391522 
Protein GI78485597 
COG category[S] Function unknown 
COG ID[COG3737] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.0798648 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTTA CCGAACATAG AGATTCCAAT ATTCTCTCCG TTAAGAAATA TCAACCAGGC 
CTGGTTAAAA TTAATGATAT CGATGTCCAT TCAAGTTGTT TTTTAAGTCA AACCGAATTA
AAAACAGACT GGCCTTGCCA TCATATTTCA GACCTAAGCG AATCCTATCT AGATCAACTT
TTAGAGCTGT CACCCGAAGT GATTATTTTA GGGACAGGAG AGCAACAAAC CTTTCCAGCT
CCCAGACTGT TTGCTTATTG TGCGCAAAAA GGCATTGGAC TTGAGGTAAT GGATAATGCA
GCGGCCTGCC GAACATACAA TGTTTTAACG ACAGAAGATC GAGAGGTCGT GCTGGCCTTA
ATCTTACCGG CAACCAACTG A
 
Protein sequence
MKFTEHRDSN ILSVKKYQPG LVKINDIDVH SSCFLSQTEL KTDWPCHHIS DLSESYLDQL 
LELSPEVIIL GTGEQQTFPA PRLFAYCAQK GIGLEVMDNA AACRTYNVLT TEDREVVLAL
ILPATN