Gene Tcr_1244 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1244 
Symbol 
ID3761800 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1359190 
End bp1360758 
Gene Length1569 bp 
Protein Length522 aa 
Translation table11 
GC content41% 
IMG OID637785976 
Producthypothetical protein 
Protein accessionYP_391513 
Protein GI78485588 
COG category[R] General function prediction only
[S] Function unknown 
COG ID[COG0645] Predicted kinase
[COG2187] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAATTTAT CTTTTTTATT TGACGAACTT TCTTGTTCAA AGCTTTACCC TCATCCTGTG 
GAAGTCATCA CCACGATCGA AACGCACATT TCCATTATTT TTTTAACCGG TGAGTTTGCT
TACAAGCTCA AAAAACCCGT CGATTTTGGC TTTCTGGATT TTACCGACCT TGCTGAACGA
AAACGATTTT GCGAACTTGA AATCAGTCTC AATCGCCGAA CAGCGCCCGA CTTATATTTA
GACGTCTGCC CTCTGTATCT GAAAAACGAT CATTTACAAT TTACACCGTA TGGTGAGCCG
GTTGAGTATG TGATTAAAAT GACGCAATTT GACCCAAATC TGGTGCTCGG CTGTTATTTG
AAAGACCACA CATTAAATAA TTCACAAATA AAACAATTGA CGGAAAGCAT TGCAAACTTT
CATTTATCCG CTGAAAGCGC CTCCAATGAC CTGGTATTTG GACACCCTGA TAATGTCATC
CATCCCATGC TGGATAATTT CCCTTCCTTA TTAAAAACAT TTACTCATCC TGAGCAACAA
TATCGATTAC GACAATTAGC GGATTGGACA CACTTTACTC AAAAAACGCT CTTTAGTGCG
CTATTGGAGC GAAAAAAACA AGGTTATATT CGAGCCTGTC ACGGCGACAT GCATCTTGAT
AACATCACGT TATTAAACGA AAAACCAACC TTGTTCGATG GCATTGAATT TAATGAACAG
TTTCGTTGGA TTGATGTGAT GAATGATTTA GCTTTTTTAA TGATTGACTT GGAAAACCGT
CACCAACTTG CGCTAAAGCG ACAGTTGTTA AGTTATTACA TTAATTTAAC AGGAGACTAT
AGTGGCTTGA ATTTACTGAC ATTCTATCAG GTTTATCGCA CAATGGTTCG CGCTAAAATC
ACCGCGTTAA GATACCATCA ATTAGAAAAA AACAGCTTCG AAGCAGAGCA TTATTATGCA
TTGGCGTTGA CGTATCTAAA ACAGGCCGAA GACACTGCTT ATGCCCTACC GGAACCCAAA
CTGATTTTAA TGCAAGGCGT ATCGGGATCC GGTAAAAGTC ATTACGCTCA ACAGATCCTA
CAACACCTCG ATGCGATCAT TATCAGCTCA GACATTGAAC GCAAACGATT GTTTGGCATT
TCCCCCCTGG AGCGTGTTTC TAAAGCAGAA AAAACATCAT TGTATTCGCC GGAAATGAAT
CGTCAAACGT ATCGAACACT GCTGGAATTG GCAAAAACCA CTTTAGCATC CGGTTACAGT
GTCATTATCG ATGCCACTTT TTTAAAAGAA GATCATCGCC GCCCTTTTCA AAAACTGGCT
CAAAAGCAGG ATTACGACTT TTATGTGTTT GCCATAGACC ACCATGACCA CGTATCGATT
ATTGAAGATA ATCTGGCTCA ACGAATACAA ACAAATGACA GCCCGTCTGA TGCGGACATC
AGCGTGATGC AACGCCAATT GACATACTAC GAAGCCCCAC ATTATGCGCC GGAACAAGTA
TTAACGCTCA AACCAAAAGA AGAATTGTCT AACGAAGCCC TCAAGAACTG GTTAAACCTG
CCGTTATAA
 
Protein sequence
MNLSFLFDEL SCSKLYPHPV EVITTIETHI SIIFLTGEFA YKLKKPVDFG FLDFTDLAER 
KRFCELEISL NRRTAPDLYL DVCPLYLKND HLQFTPYGEP VEYVIKMTQF DPNLVLGCYL
KDHTLNNSQI KQLTESIANF HLSAESASND LVFGHPDNVI HPMLDNFPSL LKTFTHPEQQ
YRLRQLADWT HFTQKTLFSA LLERKKQGYI RACHGDMHLD NITLLNEKPT LFDGIEFNEQ
FRWIDVMNDL AFLMIDLENR HQLALKRQLL SYYINLTGDY SGLNLLTFYQ VYRTMVRAKI
TALRYHQLEK NSFEAEHYYA LALTYLKQAE DTAYALPEPK LILMQGVSGS GKSHYAQQIL
QHLDAIIISS DIERKRLFGI SPLERVSKAE KTSLYSPEMN RQTYRTLLEL AKTTLASGYS
VIIDATFLKE DHRRPFQKLA QKQDYDFYVF AIDHHDHVSI IEDNLAQRIQ TNDSPSDADI
SVMQRQLTYY EAPHYAPEQV LTLKPKEELS NEALKNWLNL PL