Gene Tcr_1243 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1243 
Symbol 
ID3761799 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1358662 
End bp1359090 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content42% 
IMG OID637785975 
ProductTraR/DksA family transcriptional regulator 
Protein accessionYP_391512 
Protein GI78485587 
COG category[T] Signal transduction mechanisms 
COG ID[COG1734] DnaK suppressor protein 
TIGRFAM ID[TIGR02420] RNA polymerase-binding protein DksA 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAGCT CAAGTGATTT TATAGAAGAC TATCCTCAAT ACGAAATGAA ACCAGGTGAG 
GAATACATGA GTCCTGAAAT GCTGGAGCAT TTCAAGAACA AGCTATTGGC TTGGAAAAAG
CAGTTGATCT GGGAAGCAAC CAACACGGTT CAACACCTAA GAACTGACTC TTCAACTCCG
GCTGATCCAA GTGATCGTGC CTCTCAGGAA GAAGAATTTG CATTGGAGCT TCGTACAAGA
GATCGTGAAC GAAAGTTAAT TTCCAAAATC GATAAGTCCT TAAGAGACAT CGAAGATGGT
GATTACGGTT ATTGCAAAAT GAGCGGTGAA GAAATCGGCT TAGCACGCAT GGAAGCCAGA
CCAACAGCTA CTTTGACCGT TGAAATGAAA ACCAAACAAG AAATGCGCGA AAAACAAGGG
ATTGCTTAA
 
Protein sequence
MESSSDFIED YPQYEMKPGE EYMSPEMLEH FKNKLLAWKK QLIWEATNTV QHLRTDSSTP 
ADPSDRASQE EEFALELRTR DRERKLISKI DKSLRDIEDG DYGYCKMSGE EIGLARMEAR
PTATLTVEMK TKQEMREKQG IA