Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_1238 |
Symbol | |
ID | 3761794 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | - |
Start bp | 1352601 |
End bp | 1353146 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637785970 |
Product | hypothetical protein |
Protein accession | YP_391507 |
Protein GI | 78485582 |
COG category | [S] Function unknown |
COG ID | [COG3028] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0001561 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTCAGAC CTCGTAACGT AAACCGAACA AAACAAAAAA AAGAAACGCC TGATTGGGAA CAAGAAGAGT TTGAAAGCCG AACAGATATT AAAAAAGCCG CACAAGCCGT TACCGACTTG GGTGAGCAAA TGTCGGAGTA CTCCCCTTCA ACTTTAAAGA CGTTTAACTT ACCGGATGAA TTGCTTAAAG CCATTTTACT GCTTAAAGAA ATGCGAAACG GGCCGGCCAT TAAACGCCAG AAGTTGTACA TCGGTAAGTA CCTAAGAAAA AATGAAGATT TAATCACTCA AATTAAGCAA CGTTTATTTG AGATAGAACA AAAATCAAAG CAGCAAGCGG TGCATTTTCA TCGTTTAGAA AAGTGGCGTG ATCGTCTTGT CTCGGAAGGG GATGAAGCGC TGAATGAATT CATGGCGTTG TATACTCATG CGGATCGTAC GCAACTGCGT CAATGGATTC GAAATGCACA AAAAGAAGCG GAACAAAATA AACCGCCGAA ATCTTACCGA GCGATTTTCC AATATCTAAA AGGTCTTGAG TGGTAA
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Protein sequence | MVRPRNVNRT KQKKETPDWE QEEFESRTDI KKAAQAVTDL GEQMSEYSPS TLKTFNLPDE LLKAILLLKE MRNGPAIKRQ KLYIGKYLRK NEDLITQIKQ RLFEIEQKSK QQAVHFHRLE KWRDRLVSEG DEALNEFMAL YTHADRTQLR QWIRNAQKEA EQNKPPKSYR AIFQYLKGLE W
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