Gene Tcr_1238 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1238 
Symbol 
ID3761794 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1352601 
End bp1353146 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content41% 
IMG OID637785970 
Producthypothetical protein 
Protein accessionYP_391507 
Protein GI78485582 
COG category[S] Function unknown 
COG ID[COG3028] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0001561 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCAGAC CTCGTAACGT AAACCGAACA AAACAAAAAA AAGAAACGCC TGATTGGGAA 
CAAGAAGAGT TTGAAAGCCG AACAGATATT AAAAAAGCCG CACAAGCCGT TACCGACTTG
GGTGAGCAAA TGTCGGAGTA CTCCCCTTCA ACTTTAAAGA CGTTTAACTT ACCGGATGAA
TTGCTTAAAG CCATTTTACT GCTTAAAGAA ATGCGAAACG GGCCGGCCAT TAAACGCCAG
AAGTTGTACA TCGGTAAGTA CCTAAGAAAA AATGAAGATT TAATCACTCA AATTAAGCAA
CGTTTATTTG AGATAGAACA AAAATCAAAG CAGCAAGCGG TGCATTTTCA TCGTTTAGAA
AAGTGGCGTG ATCGTCTTGT CTCGGAAGGG GATGAAGCGC TGAATGAATT CATGGCGTTG
TATACTCATG CGGATCGTAC GCAACTGCGT CAATGGATTC GAAATGCACA AAAAGAAGCG
GAACAAAATA AACCGCCGAA ATCTTACCGA GCGATTTTCC AATATCTAAA AGGTCTTGAG
TGGTAA
 
Protein sequence
MVRPRNVNRT KQKKETPDWE QEEFESRTDI KKAAQAVTDL GEQMSEYSPS TLKTFNLPDE 
LLKAILLLKE MRNGPAIKRQ KLYIGKYLRK NEDLITQIKQ RLFEIEQKSK QQAVHFHRLE
KWRDRLVSEG DEALNEFMAL YTHADRTQLR QWIRNAQKEA EQNKPPKSYR AIFQYLKGLE
W