Gene Tcr_1231 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1231 
Symbol 
ID3761787 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1348184 
End bp1349029 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content45% 
IMG OID637785963 
ProductPHP-like 
Protein accessionYP_391500 
Protein GI78485575 
COG category[R] General function prediction only 
COG ID[COG0613] Predicted metal-dependent phosphoesterases (PHP family) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000070762 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGTCG ATTTTCATTG TCACACCAGC ATTTCTGATG GTTCGTTGAC CCCCAAAGCG 
TTAGTGGATC TTGCTAAGGA AAAAGGCATT ACAACGCTGG CCATCACCGA TCATGATACG
ACTCATGGTT ATGAGCTCAT TAAAGACTAT GCAAAAGAGC AAGATCTCGA GCTGATTGCC
GCCTCAGAAA TTTCATGTCA ATGGAAAGGG CATACTATTC ATATCGTCGG TTTGGACATC
GACATTGATA ACCCCATCCT AAAGGCTGGG TTAAAGATGA ACCGAATTAA ACGTTGGAAA
CGTGCCTTTG AGATAGATAT TAAGTTTCAA CGCCGCAACC TGAATGGCAT TCTGGAAAAT
ATTTTGCCAA AAATTCAAGA AGGCATGATT GGCCGAAATC ATTTTGCGCA TGCATTAATG
GAAAAAGGTA TTGTGAAGAA CCAGCAGCAA GCGTTTGATA AATATCTAAA AAAAGGTCGT
CCGATGTATG CGGAGGTTGA CTGGCCGGAG CTTGAAGAAG TGGTGGGCTG GATAAAAGCC
GCTAACGGCA TTGCTGTGAT TGCACACCCA CATATTTATA AAATGACCTC GAATAAATTG
AATAAAATGA TTGAAGACTT CAAAGTCGCT GGCGGTCAGG CGATTGAGGT AGTTAATCAA
CCCCGAGTGT GTGCGGAGCA AACCGGCATG GCAGATCGTG CAGAACGGTT TGAGTTATAC
GCTTCAATGG GGTCCGATTT TCATCGCCCA GAGCACACTT GGCGAGGTTT GGGGTGGCTG
GCGCCAATGC CAGCAAAATG CACACCGGTT TGGGAGTTGT TTGAGACCAA AATCACCACG
TCTTAA
 
Protein sequence
MKVDFHCHTS ISDGSLTPKA LVDLAKEKGI TTLAITDHDT THGYELIKDY AKEQDLELIA 
ASEISCQWKG HTIHIVGLDI DIDNPILKAG LKMNRIKRWK RAFEIDIKFQ RRNLNGILEN
ILPKIQEGMI GRNHFAHALM EKGIVKNQQQ AFDKYLKKGR PMYAEVDWPE LEEVVGWIKA
ANGIAVIAHP HIYKMTSNKL NKMIEDFKVA GGQAIEVVNQ PRVCAEQTGM ADRAERFELY
ASMGSDFHRP EHTWRGLGWL APMPAKCTPV WELFETKITT S