| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1228 |
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| Symbol | |
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| ID | 3761784 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | - |
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| Start bp | 1345752 |
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| End bp | 1346705 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637785960 |
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| Product | pseudouridine synthase, Rsu |
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| Protein accession | YP_391497 |
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| Protein GI | 78485572 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000000000379641 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGACAT CATCTTCAAA AACAACCTCT TCTTCTAAAA AGCCAGCCGG TGAAAAGTTG
CAAAAAATAT TGGCCCGAGG TGGGTTTGGT TCCCGGCGGG AAGTTGAAAA ACTGATTTCA
CAAGGTCTGG TAAAAGTGAA TGGTAAAGTC GCCACGCTGG GAGATCGTGC TTTTCCAACG
GACACCCTTA AAGTAAACGA CCAGTTAGTC AAAGAAACCC GTCTTGAGAA ACAACCCACG
CAGGTCATTC TTTATAACAA GCCAGAAGGG CAGGTGTGCT CACGTAAAGA TGAAAAAGGG
CGCGAAACCA TTTTTACCAG TTTGCCAAGA ATCATCAACA GTCGCTGGAT CAGTGTTGGA
CGCTTGGATA TCAACACCTC CGGGCTGTTG ATTCTCACCA ATAACGGTGA GTTGGCAAAC
CGATTGATGC ACCCATCCTA TGAAATGGAA AGAGAGTATT CCGTGCGAGT GTTTGGTGAG
GTGTCTGATG AGATTTTGGA CCGCCTTAAA AAAGGTGTCA AACTGGAAGA TGGCTTTGCC
AAGTTCGAAA GCATTGGTAA GATTCCACAA CAGGAAGAAG ACTCCATCAA CCAATGGTAT
CGCGTGGTGA TCAAAGAAGG GCGTAACCGT GAAGTGCGTC GCATTTGGGA ATCACAGGGC
GTGCAGGTCA GTCGTTTGGT TCGAACGCGT TATGGACAAT TCTCGTTACC GCGTAATTTG
CGCAGAGGCA AAAGTGAGCC TTTAACTTGG AAACAAATCA ACCAGCTGTT GAAATCGGTC
GACTTACCTG AAGAGCCGCG TCCGGACTTA AGAAACAACC CGGCTAAAGC GAAAAAGATG
GCCGCCAGAC ATGCCGAGCC GTTTAAAAAA GAAACTGGGC GCGTCAAGTA CAAAGAAAAA
GGTGAAAACC ACCGTGAAGA AAAATCCAAG CCAAAATCGG CGCGACGCCG TTAA
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| Protein sequence | MTTSSSKTTS SSKKPAGEKL QKILARGGFG SRREVEKLIS QGLVKVNGKV ATLGDRAFPT
DTLKVNDQLV KETRLEKQPT QVILYNKPEG QVCSRKDEKG RETIFTSLPR IINSRWISVG
RLDINTSGLL ILTNNGELAN RLMHPSYEME REYSVRVFGE VSDEILDRLK KGVKLEDGFA
KFESIGKIPQ QEEDSINQWY RVVIKEGRNR EVRRIWESQG VQVSRLVRTR YGQFSLPRNL
RRGKSEPLTW KQINQLLKSV DLPEEPRPDL RNNPAKAKKM AARHAEPFKK ETGRVKYKEK
GENHREEKSK PKSARRR
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