Gene Tcr_1227 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1227 
Symbol 
ID3761783 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand- 
Start bp1344953 
End bp1345657 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content42% 
IMG OID637785959 
Producthypothetical protein 
Protein accessionYP_391496 
Protein GI78485571 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.0000000104269 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGAATA AAAGTGTTCT TACCAACTTA ATCAGTTTTT TAGTGTTAGT GTCAGGCGTT 
GTGCTGGACA ACCAATGGTT ATTAATGGTT GGTTTATTTG CCTTATCGGG CGCCATCACC 
AATTGGCTTG CCATTTATAT GTTGTTTGAA AAAGTCCCAG GTCTGGTCGG GTCTGGTGTT 
ATTCCGGCGC GCTTTGAAGA ATTTAAATCG GCCATTCGTC AATTGATGAT GGAACAATTC 
TTCAGCCAGG AAAACATTGA TCGATTTGTC AGCCAAAGCG GTAAACCTAA TTTACACTTG 
GCACCGGTGA TTGAAAAAGT CGATTTAACC CCGGCTTTCG ATCGTTTGGT TGAGGTGATT 
ATGAATTCCA GCTTTGGGAG CATGCTCGGC ATGTTTGGTG GTGCGGATGC GTTAACCCCG 
CTGAAAGAAC CTTTTATCAC CAATATGAAA TCGTCTTTGA TTGAAATGAC TGAAAACGAA 
CACTTTGTGG AATTACTGCA AAATGAGATT GATCAACCAG ATGTCATGGC CGAAATTCGC 
GCTAAAGTAG AAACTATTAT TGAAGCCCGA CTCGCCGAGC TGACACCCCA GATTGTGAAA 
GCTATGGTGC AACAAATGAT TAAAGAACAC TTGGGCTGGC TTGTTGTTTG GGGCGGTGTC 
TTTGGTGGGT TAATCGGTTT TGTATCCACG TTTTTTATCG TTTAA
 
Protein sequence
MMNKSVLTNL ISFLVLVSGV VLDNQWLLMV GLFALSGAIT NWLAIYMLFE KVPGLVGSGV 
IPARFEEFKS AIRQLMMEQF FSQENIDRFV SQSGKPNLHL APVIEKVDLT PAFDRLVEVI 
MNSSFGSMLG MFGGADALTP LKEPFITNMK SSLIEMTENE HFVELLQNEI DQPDVMAEIR 
AKVETIIEAR LAELTPQIVK AMVQQMIKEH LGWLVVWGGV FGGLIGFVST FFIV