| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1217 |
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| Symbol | |
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| ID | 3761773 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | + |
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| Start bp | 1334301 |
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| End bp | 1336106 |
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| Gene Length | 1806 bp |
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| Protein Length | 601 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637785949 |
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| Product | peptidase M61 |
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| Protein accession | YP_391486 |
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| Protein GI | 78485561 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3975] Predicted protease with the C-terminal PDZ domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0353821 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCGATA TCCAGTATCG AATTAGCCCA GCCAATCCAA ACGCCCATTT ATTTTCAGTC
ACGCTTGAAA TTGCTTCCCC TAATCCAGAC GGTCAAACCG TCAGTTTGCC GAACTGGATT
CCTGGCAGTT ATTTAATCCG TGACTTTTCC AAACATATTA TTGGATTACA CGCTAAAACC
GTCTCTGGCA CCCCTCTTAC GCTAACCCCT ATCGATAAAT CGACTTGGCA ACTGGAACCC
ATTAATGAGT CAGTCACGTT GTCGTATGAG GTTTACGCCT GGGATCTTTC TGTACGCGGT
GCGCATTTTG ACACCACCCA TGCGTTCTTT AATGGCACCT CGGCCTTTTT GGCGGTTGAT
GGCCAGCGTG ACAAACCTTG TCATGTCGAC CTGATTCAAT CTGAGCATGC GCAAACGGAA
AACTGGCAAG TGGCGACCAC CCTTCCCAAA CAGCAAACCG ATGCGTTTGG CTACGGTCAT
TATGTCGCCC AGAATTATTT GGATTTAATA GAATACCCAG TTGAAATGGG TAACTTCCAT
TGTTTGGAGT TCACCGCCTG TGACATTCCG CATCGCATGA CGCTAACGGG GCGCATTGAA
ATTGATCGTC TGGATAAAGA ACGACTGATC AACGATTTAA CTAAAATCTG TGAAACCGAA
CTCAATTTGT TTGGCAAACC GTATCCGATT GAACAATATT TATTTCAAGT CACCGTCACG
GAAAAAGATT ATGGTGGTTT GGAGCATATG GATTCGACTG CACTGATTTG CGCCAGAACG
GACTTACCTT ATCTGACCGA CGAAAAAACC ACCGATGGTT ACACCCAATT CTTAGAGCTT
TGCTCTCATG AGTATTTTCA TACCTGGAAT GTTAAACGCA TTCGGCCAGA GGTGTACCAA
GCACCGCTGT TAGACAAGCC GGTGTTCACC AACCAACTTT GGTGGTTTGA GGGCATTACT
TCTTTTTACG ATCTGCAAAT CCTCAACCGC GCGGGTATTT TAGACAATGA CACTTATCTG
GATCGACTCG CGAAAGAAAT GACGCGCGTG TATCGTATGC CTGGTCGTTT TAAACAATCG
GTAGCAGAAT CCAGCCTCAT GACCTGGACC AAATTCTATC AACAAGACGA AAACGCGCCC
AATGCGATTG TCAGCTATTA CACCAAAGGC AGCTTATTGG CGCTCGGCTT GGATTTAACC
ATTCGTGCCG GCACCAACAA TCAAAAATCA TTGGATGATG TCCTTCTTTC CTTGTGGCAA
CGATATGGCG TGCCCCGTAA AGGCATTCAA GAGGGCGAAA TTGAAGCACT TTGCTCAGAA
ATATCCGGCC ACGATTTAAC CGACTTTTTT GATCGTCACT TATTCGGCAC GGAAGACATA
CCTTTCGAAT CGTTGTTCGC TAAGTTTGGC ATTGACTTCA CCTTGCGTCC TGCCACCAAT
GTCAAAGACC CAGGTGGTAA AACCGAGCAG AAAAACTTCC CGCCCCAGCT CGGTGCAAAC
TTAGTCAACA CCGAACATCA AACCGTTCGG CTGACTCATG CCTGGAATGA CCAACCTGCT
AAGTTAGCTG GCTTAGCTTC AGGTGATGAG ATCATTGCGT TAAACGGATT TAAAATCAGC
AGCATTCAAG GCTTGGAAGA CTTCTTAAGA CGTCATCAAG AAGGTGAGCG CATTCAATGC
CATTATTTCC GCCGCGATGA ACTTTATGAA ACCCACTTAA AACTGACAAG CCCGGTCCAG
GATAGAGTCT TGCTGGAGCC GGCCCAAAAC ACACAGCAAG AGGTCTTAGA ATGGTTGACG
CATTAA
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| Protein sequence | MPDIQYRISP ANPNAHLFSV TLEIASPNPD GQTVSLPNWI PGSYLIRDFS KHIIGLHAKT
VSGTPLTLTP IDKSTWQLEP INESVTLSYE VYAWDLSVRG AHFDTTHAFF NGTSAFLAVD
GQRDKPCHVD LIQSEHAQTE NWQVATTLPK QQTDAFGYGH YVAQNYLDLI EYPVEMGNFH
CLEFTACDIP HRMTLTGRIE IDRLDKERLI NDLTKICETE LNLFGKPYPI EQYLFQVTVT
EKDYGGLEHM DSTALICART DLPYLTDEKT TDGYTQFLEL CSHEYFHTWN VKRIRPEVYQ
APLLDKPVFT NQLWWFEGIT SFYDLQILNR AGILDNDTYL DRLAKEMTRV YRMPGRFKQS
VAESSLMTWT KFYQQDENAP NAIVSYYTKG SLLALGLDLT IRAGTNNQKS LDDVLLSLWQ
RYGVPRKGIQ EGEIEALCSE ISGHDLTDFF DRHLFGTEDI PFESLFAKFG IDFTLRPATN
VKDPGGKTEQ KNFPPQLGAN LVNTEHQTVR LTHAWNDQPA KLAGLASGDE IIALNGFKIS
SIQGLEDFLR RHQEGERIQC HYFRRDELYE THLKLTSPVQ DRVLLEPAQN TQQEVLEWLT
H
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