| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1212 |
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| Symbol | |
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| ID | 3760630 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | + |
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| Start bp | 1325733 |
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| End bp | 1327883 |
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| Gene Length | 2151 bp |
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| Protein Length | 716 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637785940 |
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| Product | (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA |
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| Protein accession | YP_391481 |
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| Protein GI | 78485556 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
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| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATTCTG CTCAAACACT ATATCAAACA ATTTTCAAAA CCGATGAACC AGACCCTCTC
GCGCTGCAAG CATGCCAAAT GGCGCTTGAA GCGGAGAAAG AAGAACACAA AGGCCTGGTT
AGAAGCATCG ACGCCGCAAT CATCCTTTCT GATCTAAAAC TTGACCGCGA CACCCTAATT
GCGACATTGA TCAGTGATAT GGGGTTAGAA CAACGTTATC CCATCGAAAA AATTTCTGAC
GAATTTGGCG ACCATATTGC TCAAATGGTC ACAGGTGTTC GACGCCTGAA TCACTTCAAA
GAATTTCATC CTGCAACCAC GTCAAATGAA GTGCAAACAG AGCGTCTACG TCAAATGCTG
CTCGCGATGA CATCGGATAT TCGTATCATG ATTGTAAAGC TTGCCTTCCG AGTAGCGCGT
TTACGAACGT TGAAAAACGA ACCTGAAGCC ATTCGTCAGC AAATCGCATC CGAAACACAA
ATGATCTTTG CACCCTTAGC CAACCGCTTA GGGATTGCTC AATTAAAGTG GGAGCTGGAA
GACTTGTCTT TCCGTTTTCT ACAACCCGAT ACTTACAAAG AAGTCGCACG ACAACTTGAT
GCCAAACGAC ACGGCCGAGA AACCTATATT CAAGGGATCA TACAATCATT AGAAGAGATG
CTTAAAGACA GCGGTATTGA GCACCACATT TCGGGCCGCC CAAAACACAT TTACAGCATC
TGGAAAAAAA TGACTCGCAA GAATGTGCCG ATTGATGAGC TCTTCGATTT ACGGGCCGTG
CGGATTTATG TCGACACGGT ACAACAGTGC TATGAAGTAT TGGGCATGAT TCATAGCCGA
TGGCCTTATA TTAAAGACGA GTTTGATGAC TATATCGCCA ACCCGAAAGA AAACGGGTAT
CAGTCTATTC ATACCGTCAT TATCGGCGCA GAAAATAAAA CCGTCGAAAT TCAAATTCGA
ACACACGAAA TGCATCGTCA TGCAGAGTTC GGTGTGGCAG CCCACTGGCG TTATAAAGAA
GGTGGCAAAA GCATTGACCC GGCTCTTGAA CAGAGTATCA ACTTAGTTCG CCAAATGCTT
GAATACAATG ACAATCCTGA CCTTTTGAAT GAAATCAGTA CCGAGCTTCT GACTGAGCAC
ATTTACGTCA TGACTCCTAA GAATGAGATC ATTACCATGA GCAAAGGCTC CACACCTTTG
GACTTTGCGT ATCAAATTCA TTCTGAGTTA GGACATCGTT GTCGTGGCGC CAAAATCAAT
GGCAAAATCA TGCCACTTAC CTACCAGTTG AATACAGGGG ATACGGTCGA AATTTTATCG
GTTAAAGGCG GCACGCCTAA CCGAAACTGG CTAAATCCCA ACCTGCATTA TTTAGGCAGC
AGCCGATCTC GCGCCAAGGT TCGACACTGG TTCAACCAAC AGAATAAAGA AGCCAACACC
GAGTCGGGTG AAAGCCTTTT CAATAAAGAA GCCCGTCGGC TGCATGCTGA GCACATATCA
GCGCAAGAAG TGGCTGAGCG CTTTAAGTAT GAACAGTTAG ATGAATTTTA CGAAGCGCTT
GGAAAAGGAC AAATCAACGA GCGTCAGTTG ACGAATGCCA TTCAAAAACT GATTAAACCT
GAAGAAGACA AACCACAGGC ACGCCCGCCC TCTTTCCCTC CAGAAGAACA AACAGAACCG
GGCAAGGCGT TTGTCATTGG TGCGCCACGG CTTAAAACCA CCATCGCGCC CTGCTGCGAA
CCCACCGAAA ACGATCAGAT TGTGGGTTAT GTGACACGCG GCCGCGGGGT CACGATTCAT
AAAAAAGAGT GCGCCAATAT CCTCAACTTA ACGTTTGAAG AGCAAAAGCG TTTAATCGAG
GTGGCTTGGT ACAATGCCGA GCCGCAAGGG ACAACGTATG AAGCCACATT GCAAATTCTT
GCTTTCGACC GAAAAGGGTT ATTAAGAGAC ATCATGATGG AATTAACGCA ATGGGACATT
AACGTTAACA ATTCGGATAC GCGTACAGAT AAATCCGATG GCAGCGTTTC GATGACCTTA
GATGTTGATG TGGAACCGCA TACCAACATG GGGGAATTGC TTGACCAACT GGAACAAATT
CAAAATGTTG TTTCAACATC CGTTAATTTG AATAAACAGC AAGCCTCTTA G
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| Protein sequence | MDSAQTLYQT IFKTDEPDPL ALQACQMALE AEKEEHKGLV RSIDAAIILS DLKLDRDTLI
ATLISDMGLE QRYPIEKISD EFGDHIAQMV TGVRRLNHFK EFHPATTSNE VQTERLRQML
LAMTSDIRIM IVKLAFRVAR LRTLKNEPEA IRQQIASETQ MIFAPLANRL GIAQLKWELE
DLSFRFLQPD TYKEVARQLD AKRHGRETYI QGIIQSLEEM LKDSGIEHHI SGRPKHIYSI
WKKMTRKNVP IDELFDLRAV RIYVDTVQQC YEVLGMIHSR WPYIKDEFDD YIANPKENGY
QSIHTVIIGA ENKTVEIQIR THEMHRHAEF GVAAHWRYKE GGKSIDPALE QSINLVRQML
EYNDNPDLLN EISTELLTEH IYVMTPKNEI ITMSKGSTPL DFAYQIHSEL GHRCRGAKIN
GKIMPLTYQL NTGDTVEILS VKGGTPNRNW LNPNLHYLGS SRSRAKVRHW FNQQNKEANT
ESGESLFNKE ARRLHAEHIS AQEVAERFKY EQLDEFYEAL GKGQINERQL TNAIQKLIKP
EEDKPQARPP SFPPEEQTEP GKAFVIGAPR LKTTIAPCCE PTENDQIVGY VTRGRGVTIH
KKECANILNL TFEEQKRLIE VAWYNAEPQG TTYEATLQIL AFDRKGLLRD IMMELTQWDI
NVNNSDTRTD KSDGSVSMTL DVDVEPHTNM GELLDQLEQI QNVVSTSVNL NKQQAS
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