Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_1204 |
Symbol | |
ID | 3760622 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | - |
Start bp | 1316964 |
End bp | 1317896 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637785932 |
Product | hypothetical protein |
Protein accession | YP_391473 |
Protein GI | 78485548 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3435] Gentisate 1,2-dioxygenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.919148 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCCCAA AACAAGCCGT TGAGCACAGA CAAGAAGTTG CACAGCAACA ATGGGAAGCA CAAGCTGATT TTAATGAGTA TATGTCAGCG GTGAATCCAC CGATGCCGAA GATTGATGTG GTGGATTATC CATCCAGTTT GCATCAGTCG GGTGAGACTC GAGTGATTCC TTTCGACCTT TCTAAAAGCT TGGACGTGGC TTACCCTGCT ACGACGCCTA ACTTGATGGC CAATTTTCTA AAAATCAATC CAAATGACAC ATTAAAAACA CAAGCGGAAG CGACGTCACA AATGTTTTTT GTGATTCGTG GCTCGGGTCG AACGCAAATG TCTGAAGGAA CTATTGAGTG GAAAGCAGGC GATTTGTTTA CCCTGCCATC AGTGGTTGAT GCTTTGCACA CTGCGACTGA AGACACAGCC ATTTACTGGG TCCATGATGC GCCGTTATTA GAATATTTGG GGGTTGCCCC TAAAACAAAA CGCTTTACGC CAGTTCTTTA TACTAAGGAG CGTTTGGACA ACGAGTTGGA TAAAATCCGT GAAGAAGCGG CAGGACGAAA CCGCACTGGG ATTCTGCTCT CAAACCCCCA TTTTCCGCAC ACGTTAACGC TGACGCATAC GTTATGGTCG CTTTATAATG CTTTGCCAGC CGATGTTGTA CAAAAGCCGC ATCGACATAA TTCCGTTGCG CTTGATTATT GTGTTTCGGC CGGGCCAGAC ACTTACACTA TGATTGCTAA AGAGATTGAT GAAGATGGTA ACCTGATTGA TCCGGTTAAA GCCATGTGGA CGCCAGGATC TGTTTTTGTG ACGCCTCCGG GTTGGTGGCA TTCACATCAT AACCATTCTG ATCAGGATGC GATTGTGCTG CCGATTCAAG ATGCTGGAAT CATTATGAAT ATGCAAGTAT TGGACTTTCA ATATATCAAA TAA
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Protein sequence | MIPKQAVEHR QEVAQQQWEA QADFNEYMSA VNPPMPKIDV VDYPSSLHQS GETRVIPFDL SKSLDVAYPA TTPNLMANFL KINPNDTLKT QAEATSQMFF VIRGSGRTQM SEGTIEWKAG DLFTLPSVVD ALHTATEDTA IYWVHDAPLL EYLGVAPKTK RFTPVLYTKE RLDNELDKIR EEAAGRNRTG ILLSNPHFPH TLTLTHTLWS LYNALPADVV QKPHRHNSVA LDYCVSAGPD TYTMIAKEID EDGNLIDPVK AMWTPGSVFV TPPGWWHSHH NHSDQDAIVL PIQDAGIIMN MQVLDFQYIK
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