Gene Tcr_1204 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1204 
Symbol 
ID3760622 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1316964 
End bp1317896 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content45% 
IMG OID637785932 
Producthypothetical protein 
Protein accessionYP_391473 
Protein GI78485548 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3435] Gentisate 1,2-dioxygenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.919148 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCCCAA AACAAGCCGT TGAGCACAGA CAAGAAGTTG CACAGCAACA ATGGGAAGCA 
CAAGCTGATT TTAATGAGTA TATGTCAGCG GTGAATCCAC CGATGCCGAA GATTGATGTG
GTGGATTATC CATCCAGTTT GCATCAGTCG GGTGAGACTC GAGTGATTCC TTTCGACCTT
TCTAAAAGCT TGGACGTGGC TTACCCTGCT ACGACGCCTA ACTTGATGGC CAATTTTCTA
AAAATCAATC CAAATGACAC ATTAAAAACA CAAGCGGAAG CGACGTCACA AATGTTTTTT
GTGATTCGTG GCTCGGGTCG AACGCAAATG TCTGAAGGAA CTATTGAGTG GAAAGCAGGC
GATTTGTTTA CCCTGCCATC AGTGGTTGAT GCTTTGCACA CTGCGACTGA AGACACAGCC
ATTTACTGGG TCCATGATGC GCCGTTATTA GAATATTTGG GGGTTGCCCC TAAAACAAAA
CGCTTTACGC CAGTTCTTTA TACTAAGGAG CGTTTGGACA ACGAGTTGGA TAAAATCCGT
GAAGAAGCGG CAGGACGAAA CCGCACTGGG ATTCTGCTCT CAAACCCCCA TTTTCCGCAC
ACGTTAACGC TGACGCATAC GTTATGGTCG CTTTATAATG CTTTGCCAGC CGATGTTGTA
CAAAAGCCGC ATCGACATAA TTCCGTTGCG CTTGATTATT GTGTTTCGGC CGGGCCAGAC
ACTTACACTA TGATTGCTAA AGAGATTGAT GAAGATGGTA ACCTGATTGA TCCGGTTAAA
GCCATGTGGA CGCCAGGATC TGTTTTTGTG ACGCCTCCGG GTTGGTGGCA TTCACATCAT
AACCATTCTG ATCAGGATGC GATTGTGCTG CCGATTCAAG ATGCTGGAAT CATTATGAAT
ATGCAAGTAT TGGACTTTCA ATATATCAAA TAA
 
Protein sequence
MIPKQAVEHR QEVAQQQWEA QADFNEYMSA VNPPMPKIDV VDYPSSLHQS GETRVIPFDL 
SKSLDVAYPA TTPNLMANFL KINPNDTLKT QAEATSQMFF VIRGSGRTQM SEGTIEWKAG
DLFTLPSVVD ALHTATEDTA IYWVHDAPLL EYLGVAPKTK RFTPVLYTKE RLDNELDKIR
EEAAGRNRTG ILLSNPHFPH TLTLTHTLWS LYNALPADVV QKPHRHNSVA LDYCVSAGPD
TYTMIAKEID EDGNLIDPVK AMWTPGSVFV TPPGWWHSHH NHSDQDAIVL PIQDAGIIMN
MQVLDFQYIK