Gene Tcr_1194 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1194 
Symbol 
ID3760612 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand+ 
Start bp1307056 
End bp1308177 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content42% 
IMG OID637785922 
Producthistidinol-phosphate aminotransferase 
Protein accessionYP_391463 
Protein GI78485538 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0079] Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase 
TIGRFAM ID[TIGR01141] histidinol-phosphate aminotransferase 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTCAGT CTCTCTTTTG TGATGAAGTT TTGCCCCATA TCAGTGACAT TCAAGTTTAT 
CAGCCTGGCA AACCCATTTC AGAAGTGCAG CGAGAACATA ACCTGCTTCG TATCTCAAAA 
TTGGCGTCGA ATGAAAACCC ATTAGGCGCC AGCCCTAAAG CAATCAAAGC GGTACAGTCT 
GAACTTATTA ACATGGGACG CTACCCAGAT GGAAATAGCT TTTACCTAAA GCAAGATTTA 
GCCGATTTTT TACAAAAACA ACCGACTGAA ATTGCACTAG GAAATGGATC CAATGAATTG 
CTTGAACTGG TGGCCCGTAT TTTTGCCGGC AAAGGGGATG AGATTATCTA TTCCCAGTAT 
GCCTTTGCCG TCTATTCAAT CAGCACCCAG GCGGTAGGTG CTACAGGCAT TGAAGTTCCG 
GCAAAAGAGT GGGGGCATGA CCTGGAAGCC ATGGCCGAAG CCATTACCGA TAAAACCAAA 
TTAATCTATT TAGCCAACCC GAACAACCCA ACCGGAACGT TGTTTACGCA AAAGGAATGG 
GAAGCGTTTA TCTCAAAAGT TCCTTCCAAT GTGATCGTCG TTCTGGACGA AGCTTATACT 
GAATATGTCA CGCATGACGA ATATGCAAAC GGATTAAACT ACCTTGAACA ATACCCAAAT 
TTAATTGTGT CTCGAACCTT TTCTAAAGCC TATGGTCTTG CGGCTTTAAG AATTGGTTAC 
ATGGTAGCAA ACGAGGAATT AATTGCGTAC ATCAATCGGT TACGCGCACC TTTCAACATT 
AACCATTTAG CGCAAGTGGC TGCCAAGGCC GCGTTAAAAG ACCCTATGTT TGTGAAGAAA 
ACCGTTGATT TAAATACGCA GGGGATGCAA ACACTCACAC AGTTCTTTGA AGAAAAAGGG 
CTTTCATACA TTCCTTCTCA AGGGAATTTT GTATGTGTTG ATCTCGGGCC TGATTCACTT 
AAAATAAATC AAGCGTTATT GAAAGAAGGC GTTATTGTCA GACCCGTGGC TCCGGAAGGG 
AAGTTCAGTG AATTTTTAAG AATTTCTATT GGCTTGCCCA ATGAAAACCA ACATTTCATG 
GCGGCTTTGA ATAAAATACT CACCTCATCA AACTTCAAGT AA
 
Protein sequence
MSQSLFCDEV LPHISDIQVY QPGKPISEVQ REHNLLRISK LASNENPLGA SPKAIKAVQS 
ELINMGRYPD GNSFYLKQDL ADFLQKQPTE IALGNGSNEL LELVARIFAG KGDEIIYSQY 
AFAVYSISTQ AVGATGIEVP AKEWGHDLEA MAEAITDKTK LIYLANPNNP TGTLFTQKEW 
EAFISKVPSN VIVVLDEAYT EYVTHDEYAN GLNYLEQYPN LIVSRTFSKA YGLAALRIGY 
MVANEELIAY INRLRAPFNI NHLAQVAAKA ALKDPMFVKK TVDLNTQGMQ TLTQFFEEKG 
LSYIPSQGNF VCVDLGPDSL KINQALLKEG VIVRPVAPEG KFSEFLRISI GLPNENQHFM 
AALNKILTSS NFK