Gene Tcr_1191 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1191 
Symbol 
ID3760609 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1302070 
End bp1304685 
Gene Length2616 bp 
Protein Length871 aa 
Translation table11 
GC content45% 
IMG OID637785919 
ProductDNA gyrase, A subunit 
Protein accessionYP_391460 
Protein GI78485535 
COG category[L] Replication, recombination and repair 
COG ID[COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit 
TIGRFAM ID[TIGR01063] DNA gyrase, A subunit 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGATT TTGCGAGAGA AATTCTACCA ATCTCATTAG AAGATGAGAT GCAACAATCT 
TATCTAAGTT ATGCGATGAG TGTTATTGTC GGGCGTGCAC TGCCTGACGT CAGAGATGGT
TTGAAACCTG TTCACCGACG TGTTTTATAC GCAATGAATG AATTAGGGAA CTCTTGGAAT
AAGCCCTATA AAAAATCCGC CCGTATCGTC GGGGACGTGA TCGGTAAATA TCACCCACAC
GGTGATACCG CGGTTTACGA TACGATTGTG CGTATGGCGC AACCTTTCTC TCTCCGCTAT
ATGCTGGTTG ATGGGCAAGG TAACTTCGGG TCAATTGATG GCGATTCGCC TGCAGCTATG
CGTTATACCG AAGTACGCAT GTCTAAAATT GCCCATGAGT TGCTCGCAGA TCTTGAAAAA
GAAACGGTTA ATTTTACTCC TAACTACGAT GGGTCTGAAT CTGAACCGGA CGTGCTACCT
ACCCGTATTC CAAACTTATT GGTCAACGGT TCTTCAGGGA TCGCCGTCGG GATGGCCACA
AATATCCCAC CGCACAACTT AAACGAGACA GTCAGTGCGT GTATTGCATT GATTGATAAC
CCTGAACTTA CTATCTCTGA ATTGATGGAA TTCCTTCCTG GGCCAGACTT TCCAACGTAC
GGCATTATCA ATGGAACAAA AGGTATTCGT GAAGCTTATG AAACAGGTCG TGGACGCGTT
CAGATGCGTG CTAGAACCAG TGTCGAAACG GATAAAAATG GCAAGTCGTC CATCATTGTT
CATGAAATTC CATACCAAGT TAACAAAGCC AAACTGATTG AGCGTATTGC TGAACTGGTA
AAAGAGAAAA AAATTGAAGG CATCTCTGCA CTGCGCGATG AATCCGATAA AGACGGAATG
CGTATTGTTA TTGAAGTGAA GCGTGGTGAA GTGCCGGAAG TATTAATCAA CAACCTTTAC
AAACAAACCA CCATGCAGAC TGTCTTTGGT ATCAACATGG TGGCCTTGAT TAATAGCCAA
CCTAAGCTTT TAAACCTAAA AGACGTGCTC GAAGCCTTTA TTCGTCACCG TCGTGAAGTG
GTGACTCGTC GCACTATCTA TGATCTACGC AAAGCACGTG AGAAAGCGCA CATATTAGAA
GGGCTGGCAT TAGCTCTCAA CAACATCGAT GAAATGATTG AGTTGATTAA AGCCTCGCCA
AGTCCATCGG TCGCGAAAGA GCGCATGCTG GAAAGAGACT GGTCTATCGG AAATGTTGAA
CAGCTTCTTG AAAAGGTTGA AATGAAAGAT GTTCGCCCTG AGGACCTTCC TGAAGGTTTT
GGAGCAGATG GTAGTGGTGT TTATAAACTT TCACCGGCAC AAGCACAAGC CATCTTAGAA
ATGCGTTTGC ATCGTTTAAC AGGATTAGAG CAGGACAAAA TCATTGCCGA ATACCGTGAT
TTGGTTCTTA AAATCGCCGA ATTCTTAGAA ATCTTACGCA ACCCAGATCG CTTAACAGAA
GTGGTGCGTG AAGAACTGCA AGAAGTGGTT GAAAATTTTG GTGATAAACG TCGAACTGAA
ATTGACCACA GTTATCAAGA CATTGACGCC GAAGATTTGA TTGCAGTAGA AAACCGTATT
GTCACACTGT CACGTGACGG CTATATCAAA ACACAGCCGT TATCAGATTA CCAAGCTCAG
CGTCGTGGTG GACGAGGCAA GTCTGCTACA CAAATGAAAG AAGATGATGA GATCGGTCAA
ATGATCGTCG CCAGCACGCA CGACATGCTG CTGTGCTTCT CGAATCGAGG CAAACTGTAT
TGGCAAAAAA CTTGGCAGTT ACCGTTGGCC AGCCGTGGCT CAAAAGGCAA GCCGATTGTA
AATGTCTTGC CGCTTGAAAC AGGGGAGCAC ATCACTTCCA TCTTGCCGGT ATCGGAATTC
TCGGAAGGCT ATTATGTCTT CATGGCCACC AAACAATCTA CTGTTAAACG CGTGGCTTTA
TCAGACTTCT CTCGCCCTAG AGCCAACGGT ATTATTGCCG TTGACTTACT GGACGATGAT
GAGCTGGTAG GAACAGCCAT TACCGATGGC GAACAAGACA TTATGCTGTT CAGCAACATA
GGTAAAGCCA TCCGCTTTGA TGAAAACGAT GTTCGTGTCA TGGGGCGTCA AGCACGTGGG
GTTCGCGGCA TGAAGCTGAA AGATGGCATG TCCATCATCA GCATGCAGGT GGCACGTAAA
GACACCTTGA TCTTAACCGC CACTGAACAT GGTTATGGGA AGTGTACTCC AGTAGATGAC
TACTCAACAA TCAACCGTGG TGGACAAGGT GTTATCTCAA TTAAAACATC TGACCGTAAC
GGTAATGTTG TTTATTCAGT CGCTGTCACG CCGGATCAAG AAGTGGTGTT AATCACCAAC
AAAGGCACTT TGGTCCGAAC ACGCGTATCT GAAATTTCAG TGGTCGGGCG AAACACACAA
GGTGTTAAAT TGATTAATGT CGGTAAAGGT GAAATCGTCG TTGGACTGGC GGTTGTTGAT
GTTCAAGAAG ACGAGCTACC CGACATCGAT ATCGAAGATA TGCCCGAATC GGATGAAGCA
CCAGAGATCG TCTCCGAAGA CGACACTGAA CAATAA
 
Protein sequence
MSDFAREILP ISLEDEMQQS YLSYAMSVIV GRALPDVRDG LKPVHRRVLY AMNELGNSWN 
KPYKKSARIV GDVIGKYHPH GDTAVYDTIV RMAQPFSLRY MLVDGQGNFG SIDGDSPAAM
RYTEVRMSKI AHELLADLEK ETVNFTPNYD GSESEPDVLP TRIPNLLVNG SSGIAVGMAT
NIPPHNLNET VSACIALIDN PELTISELME FLPGPDFPTY GIINGTKGIR EAYETGRGRV
QMRARTSVET DKNGKSSIIV HEIPYQVNKA KLIERIAELV KEKKIEGISA LRDESDKDGM
RIVIEVKRGE VPEVLINNLY KQTTMQTVFG INMVALINSQ PKLLNLKDVL EAFIRHRREV
VTRRTIYDLR KAREKAHILE GLALALNNID EMIELIKASP SPSVAKERML ERDWSIGNVE
QLLEKVEMKD VRPEDLPEGF GADGSGVYKL SPAQAQAILE MRLHRLTGLE QDKIIAEYRD
LVLKIAEFLE ILRNPDRLTE VVREELQEVV ENFGDKRRTE IDHSYQDIDA EDLIAVENRI
VTLSRDGYIK TQPLSDYQAQ RRGGRGKSAT QMKEDDEIGQ MIVASTHDML LCFSNRGKLY
WQKTWQLPLA SRGSKGKPIV NVLPLETGEH ITSILPVSEF SEGYYVFMAT KQSTVKRVAL
SDFSRPRANG IIAVDLLDDD ELVGTAITDG EQDIMLFSNI GKAIRFDEND VRVMGRQARG
VRGMKLKDGM SIISMQVARK DTLILTATEH GYGKCTPVDD YSTINRGGQG VISIKTSDRN
GNVVYSVAVT PDQEVVLITN KGTLVRTRVS EISVVGRNTQ GVKLINVGKG EIVVGLAVVD
VQEDELPDID IEDMPESDEA PEIVSEDDTE Q