Gene Tcr_1185 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1185 
Symbol 
ID3760603 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1294588 
End bp1296231 
Gene Length1644 bp 
Protein Length547 aa 
Translation table11 
GC content45% 
IMG OID637785913 
ProductABC transporter related 
Protein accessionYP_391454 
Protein GI78485529 
COG category[R] General function prediction only 
COG ID[COG4172] ABC-type uncharacterized transport system, duplicated ATPase component 
TIGRFAM ID[TIGR02323] phosphonate C-P lyase system protein PhnK 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTTCAA AACAACCCGT TTTAAGTGTT GAAAACCTAA CCATCAGAGT GGGTGTCAAT 
GAACTGGTCA AACGAATCAG TTTCGAGATT CAACGGGGTG AAATTTTTGC ACTTGTCGGT
GAGTCCGGCA GTGGTAAATC ATTAACCTCT TTAGCCATTA TGCGGTTATT GCCTGAAGCC
TTAGACATTG CTGACGGCAA AGTCTTGCTA AACGAACAAA GCCTTTTCAC ACTGCCTGAG
AACAGAATGC AGCGCATTCG TGGTCAGCAG GTGGCGATGA TCTTTCAAGA ACCGATGACC
TCACTGAACC CGGTGATGAA GGTGGGTGAA CAGGTTGCTG AAGTCTTGCG TATTCATTTA
AACATGCACC GTAGCCAAGC CCGTGAAAAG GTCATTGCAC TGTTTGAAGA AGTGGGCATT
CCAGAACCGG AATCACGTTA CGACTGGTAC CCACATCAGT TATCAGGTGG GCAAAAACAA
CGTGTGATGA TCGCAATGGC TTTAGCCTGT GAACCGGACT TGCTGATTGC CGATGAGCCC
ACAACCGCTT TAGATGTGAC GATTCAGGCC CAAGTATTAA AACTGCTAAA GAAAATTCGA
GATGAACGCG GCCTGGCGAT TTTATTCATC ACGCACGATA TGGGCGTCGT CAATGAAATG
GCGGATCATG TCGCTGTCAT GCGTCAAGGT GAAATCGTCG AACAAGCGGA TAAAGCGCAT
TTTTTCACCG CTCCGACGCA TCCTTATACA CGTAAATTAC TGGAAGATGC GGTTCCAAAA
CACACTTATA AACCGGTTTC AGATACAAAA AATCTACTTC AAATCAATGA TTTAAAAGTG
CACTTTCCTA TAAAAAAGGG CATTTTCCAA CGTACCGTAG GCTATGTCAA AGCGGTGGAC
GGCGTGACAT TATCCATTGC AAAAGGGGAG ACCTTAGCTT TGGTGGGCGA ATCCGGCAGT
GGTAAAAGCA CCATTGGGCA GGCCATTTTA CGTTTAATAG ACACCACCGA TGGCTCGGTT
GTTTTTCAGA ACAACGAACA AGGCATTGAT TTTATTAATT TAAATGAAAA AAACATGAAA
CCCTTGCGCA AAAAGGTGCA AGTGATTTTT CAGGATCCTT TCTCAGCATT GAACCCGAGA
ATGCAAATCA GTGACATTAT TCGTGAAGGA ATGAACAGCT TGAACGTTGG GCCAAAAGGG
CGCGAGGCAC AAGATCAACG AATTGATGAT TTATTGCAGC AAGTGGGACT GTTGCCGGAA
CACAAATATC GTTATCCACA TGAATTCTCG GGCGGCCAAC GTCAACGAAT CGGTATTGCA
CGCGCGTTGG CCGTGGAGCC GGAATTGATT ATTTGCGATG AGCCGACCAG TGCCTTGGAT
GTTTCTGTTC GAGCACAGGT ATTGGATTTA CTTAATGATC TGCAAAAAAC CTATCAAATG
TCTTACTTAT TCATCACCCA TGACTTATCC ATTATTCCGG CCATTGCGCA TAAAGTGGCG
GTAATGAAGC AAGGAAAGAT TGTCGAGCAA GGCAATGTAG AAGCCATTAT GTGCAACCCA
CAACATAAAT ACACTCAAAA ACTCTTAAAT TCGGCACCGG AATTGATCAA AAAAGCCTTT
AACGACCAAC CGATTGCCCG TTAA
 
Protein sequence
MTSKQPVLSV ENLTIRVGVN ELVKRISFEI QRGEIFALVG ESGSGKSLTS LAIMRLLPEA 
LDIADGKVLL NEQSLFTLPE NRMQRIRGQQ VAMIFQEPMT SLNPVMKVGE QVAEVLRIHL
NMHRSQAREK VIALFEEVGI PEPESRYDWY PHQLSGGQKQ RVMIAMALAC EPDLLIADEP
TTALDVTIQA QVLKLLKKIR DERGLAILFI THDMGVVNEM ADHVAVMRQG EIVEQADKAH
FFTAPTHPYT RKLLEDAVPK HTYKPVSDTK NLLQINDLKV HFPIKKGIFQ RTVGYVKAVD
GVTLSIAKGE TLALVGESGS GKSTIGQAIL RLIDTTDGSV VFQNNEQGID FINLNEKNMK
PLRKKVQVIF QDPFSALNPR MQISDIIREG MNSLNVGPKG REAQDQRIDD LLQQVGLLPE
HKYRYPHEFS GGQRQRIGIA RALAVEPELI ICDEPTSALD VSVRAQVLDL LNDLQKTYQM
SYLFITHDLS IIPAIAHKVA VMKQGKIVEQ GNVEAIMCNP QHKYTQKLLN SAPELIKKAF
NDQPIAR