| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1182 |
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| Symbol | |
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| ID | 3760600 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | + |
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| Start bp | 1290098 |
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| End bp | 1292227 |
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| Gene Length | 2130 bp |
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| Protein Length | 709 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637785910 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_391451 |
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| Protein GI | 78485526 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.256161 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGTTAC TATCCGCCTC AGGATGTGAA CAAAGCCGTT GGAACAGTCC ATATGATTTG
AAAATGGTTG AGCAACCCAT TTTATTTAGC TCTTTTTCTT CTAAGCCAAA ACACTTAGAC
CCCGTTATTT CTTACAATGC CAACGAATGG TCAATTTTAA GCCAGGTGTA TGAGCCGCCG
CTGCAATACC ATTATTTAAA ACGTCCTTAT GCATTGGAGC CGTTAACACT TCAGTCGTTG
CCTGAAGTGA TTTATTTAAA TCAGCAAGCG CAACCCATTC CTGATAAGTC TACTGATATT
GCTTATTCAG AATACACACT GTATTTGAAC CCGAACATTC GATACCAACC GCACCCAGCA
TTTGTTAAAG ATAAAAAAGG GCGGTTGGCA CTTGCGCATT TAACAGCTGA CCAATTATCA
CAGATCACAA CGATGGAAGA TTTTAAACAA ACGGATACTC GTTTATTGGT GGCGGAAGAC
TATGCGTATG CGATTAAACG AATGGCTGTC CAACAGAACC ACTCTCCAAT ACTTGGCACA
ATGAAACAAT TAATTGTTGG CTTATCGGAT TTTTCAGAGC AGGTTTCAAA ATCGCCGGTG
TCCCCACAGC AACTTCGAAA AATGCATATT TCCGGTGTTC AAGTGGTTTC TGACGCTGAA
TTGAAGATTC GAATTCATGG AAAATATCCG CAATTTTTAT ATTGGCTAAG CATGAATTTC
TTCGCGCCGA TTCCTTGGGA AGCGGAAGTC TTTTTTAATC AGCCAGGCCT GGCTGAAAAA
AACATTTCAT TAGATACCTA TCCTGTTGGA ACAGGCGCTT ATCAACTGGT TGAAAACAAT
CCAAACAAAC GTATGCGCTT ACTTGCAAAC CCCAATTACC AACATGGCTT CTATCCCGAA
TCCGGTTTGG CTGAAAATGC CGACCCCATT CTGCTTAAAG ATGCAGGCAA ATCGTTACCG
TTTATCAAAG AAATCATCTA TTCTTTAGAA AAAGAAAGCG TTCCCTTGTG GAATAAGTTT
CTGCAAGGGT ATTATGATGC CTCGGGCGTC AGCTCAGACA GTTTTGACCA GGCGATTTCA
ATCAGCGGCG GGGGGCATTT AAACTTAACC CCTGAAATGA AAAACAAAGG CATTCAGTTT
TTAAATACGG TGGAACCAAC CATTTATTAT TTTGGCTTCA ATATGGCCGA TCCAATTGTG
GGTGGATACT CCAAAAAACA GCGAAAACTT CGCCAAGCCT TGAGTATTGC CCTAAATTTT
GAAGAATATA TCTCTATCTT TATGAATGGT CGAGGGGTTG CCGCACAAAG CCCGATTCCA
CCCGGCATAT TTGGACACCA ATCGGGTAAA AATGGCATTA ACACCGTTAT TTATGATTGG
AAAAACGGAC ACCCAAAACG CAAGCCGATT GAAGTGGCTC AAAAACTATT AGCCGAAGCC
GGGTATCCGA ATGGCCGTAA ACCGAATGGT GAACCGTTGG TTTTGCATTA TGATACGGCT
GCGACAGGGC CAGACAGTAA AGCTCAATTA AACTGGTACC GTAAACAATT TGCCAAACTG
GGGATTGAAC TGGTCATTCG GGCAACCGAC TACAACCGTT TCCAAGATAA AATGCGTGGC
GCGAAAGGGC AAATGTTCAG TTGGGGTTGG AACGCCGACT ACCCGGATCC AGAGAATTTT
TTATTCTTAT TAAACGGAGC GCAATCCGTT ACTAAAACCA ATGGAGCGGG CATTAACTAC
GCCAATTATG ACAATCCTGA ATTTAACCGT TTGTTCAAAA AAATCAAAAC CATGGAAAAC
TCTCCTGAAA GACTGGCTTT AATTAAAAAA ATGGTTCGAA TTGTTCAACA GGATGCGCCT
TGGGCTTGGG GCTTCAACCC AAAAAGTTTG GCGCTTTACC ACAGCTGGTA TCATAATGTT
TGGGCGAACC CGTTGGCGAA CAATACCCTC AAGTACAAAC GAATTGATGC GGTAGAGCGA
GCACAAAAAC AAAAAGCCTG GAATAAGCCT GTTATCTGGC CGATTTTAAT TGTTTTATTA
TTATTGGTGG TGTCTGTGTA TCCGTTGATG AAAGCTTATC AAGCACGACA AAAGGCGGTC
GTTGTACCGC ACAACAAAGG AGACGTGTAA
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| Protein sequence | MLLLSASGCE QSRWNSPYDL KMVEQPILFS SFSSKPKHLD PVISYNANEW SILSQVYEPP
LQYHYLKRPY ALEPLTLQSL PEVIYLNQQA QPIPDKSTDI AYSEYTLYLN PNIRYQPHPA
FVKDKKGRLA LAHLTADQLS QITTMEDFKQ TDTRLLVAED YAYAIKRMAV QQNHSPILGT
MKQLIVGLSD FSEQVSKSPV SPQQLRKMHI SGVQVVSDAE LKIRIHGKYP QFLYWLSMNF
FAPIPWEAEV FFNQPGLAEK NISLDTYPVG TGAYQLVENN PNKRMRLLAN PNYQHGFYPE
SGLAENADPI LLKDAGKSLP FIKEIIYSLE KESVPLWNKF LQGYYDASGV SSDSFDQAIS
ISGGGHLNLT PEMKNKGIQF LNTVEPTIYY FGFNMADPIV GGYSKKQRKL RQALSIALNF
EEYISIFMNG RGVAAQSPIP PGIFGHQSGK NGINTVIYDW KNGHPKRKPI EVAQKLLAEA
GYPNGRKPNG EPLVLHYDTA ATGPDSKAQL NWYRKQFAKL GIELVIRATD YNRFQDKMRG
AKGQMFSWGW NADYPDPENF LFLLNGAQSV TKTNGAGINY ANYDNPEFNR LFKKIKTMEN
SPERLALIKK MVRIVQQDAP WAWGFNPKSL ALYHSWYHNV WANPLANNTL KYKRIDAVER
AQKQKAWNKP VIWPILIVLL LLVVSVYPLM KAYQARQKAV VVPHNKGDV
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