| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1173 |
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| Symbol | |
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| ID | 3760318 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | + |
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| Start bp | 1278826 |
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| End bp | 1279518 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637785897 |
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| Product | lipoprotein releasing system, ATP-binding protein |
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| Protein accession | YP_391442 |
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| Protein GI | 78485517 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | [TIGR02211] lipoprotein releasing system, ATP-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.659944 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGTGATT TAATTTTACA AGCCTCGAAT CTTGAAAAAG AATACCGCGA CGGAAAGTTA
AAAACGCCGG TCATTAAAGG ACTGGATTTT GAACTGAGAG CGAATGAAAA GGTCGCGATT
GTTGGCAGCT CTGGCTCGGG AAAAAGTACC TTGTTACATT TACTGGCAGG TCTTGATAAA
CCAACCGGGG GAACTGTCTC CTTAATGTCG CAAGCGTTTT CAGGTTTAAA TGAAGTGAAA
CGAGGGCGCC TGCGTAATCA ATACATGGGT TTTGTTTATC AATTTCATTT TCTACTGCCA
GAATTGAATG CACTGGAAAA TGTAATGCTG CCTTTACGCG TCAGACGGAC GCCTTCAAAA
GACGCCGAAA AACAGGCAAG TGCATTACTT GACCGCGTTG GTCTTGGGCA CCGTATTCAT
CACAAACCGT CAGAGTTATC AGGAGGGGAG CGTCAACGAG TTGCGATTGC TCGCGCTTTA
ATCACCAAAC CCGCCTGTGT GTTAGCGGAC GAACCGACAG GCAACCTGGA TGAAAGCTCT
GCGCAACAGG TATTCGATTT AATGCTGGAA TTAAACCAAG AGCAAAACAC TGCATTATTG
GTTGTCACGC ACGATTTAAA ATTGGCCGCA AAAATGGATC GTCAATATCA ATTAACAGAA
GGGCATTTTA TTCTGCCTTC AGAAACGCTT TAA
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| Protein sequence | MSDLILQASN LEKEYRDGKL KTPVIKGLDF ELRANEKVAI VGSSGSGKST LLHLLAGLDK
PTGGTVSLMS QAFSGLNEVK RGRLRNQYMG FVYQFHFLLP ELNALENVML PLRVRRTPSK
DAEKQASALL DRVGLGHRIH HKPSELSGGE RQRVAIARAL ITKPACVLAD EPTGNLDESS
AQQVFDLMLE LNQEQNTALL VVTHDLKLAA KMDRQYQLTE GHFILPSETL
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