Gene Tcr_1162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1162 
Symbol 
ID3760649 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1265905 
End bp1267110 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content43% 
IMG OID637785886 
Productmolybdopterin binding domain-containing protein 
Protein accessionYP_391431 
Protein GI78485506 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0303] Molybdopterin biosynthesis enzyme 
TIGRFAM ID[TIGR00177] molybdenum cofactor synthesis domain 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.00400548 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGAAGC AAAATAGCGA ATTAAGGCAT GATTTTGATG AAGTCTTCAG TTTGATGATG 
TCAAAAGCAA CGGCATCGAA TAAACAAGAA CAAATTCCTT TATCCGATGG AGCCGGACGA
GTCTTAGCGG AGGATCTTTT TTCACCGATA TCTGTACCTG CTTGGCGACA AAGTGCGATG
GATGGGTATG GTTTCTCAAC GCTTTCCTCT CTGGATTGCC TGCCTGTCAA ACAAACAGCT
TACGCTGGCA ATGCCGTTAT ACCGATGTCT AAAAATGAAG CCATCCACAT TATGACGGGG
GCCGTTGTCC CCGATCAGGT TGATACCATC GTGCCTATTG AAAACGCATG TGTTCAGCAG
ACAGAACAAG GACAATATGT TTTCAAACCG ACCTCTATAG AATCGGGTCG ACATATTAAA
CCCATTGGGT CGGATGTTAA AGAAGGCCAA AAATTGTTGT CTAAAGGACA CGTCATCAGA
CCTCAAGATC AAGCGTTATT AGCCTCGGTT GGAATCCATC AATTATCGGT TTTTCAAAAA
GTTACTCTGG TGATATTTAC TTCAGGAAAT GAATTGATTT CACCAGGAAA CTCTTTGAAA
AAAGGGCAGA TTTATGATGC CAATGCCTTT TTAATAGAAT CCCTTTGCCA ACGAATTCCG
GTTGATGTCA TCGCCAATGA AAGACTGGAA GATGATGAGG AAAAAATCAA ACATCGTTTG
GCTGCTTGGC AAGGCCAGGT TGATGTAATT CTAACGGTGG GAGGCGCTTC GGTAGGAGAA
AAGGACTTTA TAAAGACATC CTTAGCATCC TACCCCAATT TTTGGACATG GAAACTTAAT
ATGAAGCCTG GTAAACCGTT CTCAATGGCG ATTTCACAGC AAACCAGTAT TCTTGCGTTG
CCGGGTAATC CTCTGGCAGC TTTCATGACT TTTCAGGCAT TGGCTACTCC TTTTATTCAA
AAACAAGCCG GTATAAAAGA GTGGCAAAAC AAACCGGCAA AAAGGGTACT TGCCAGTGAT
CTTAAAATAA ACAATGATCG CCTGATATGG TGTCAGGTTA TGGAAACTGA ACAAGGGGTA
ACCCCCATTT TAAATGCCTC ATCAAGTCAG CTAATGAATT TGGTTGAATC CGATGGTTAT
ATCCGAATCA ACCCAGGTCA AAACTATCAG GCAGGCGACG TTGTTGATTT TTGGGGAACC
CCGTGA
 
Protein sequence
MLKQNSELRH DFDEVFSLMM SKATASNKQE QIPLSDGAGR VLAEDLFSPI SVPAWRQSAM 
DGYGFSTLSS LDCLPVKQTA YAGNAVIPMS KNEAIHIMTG AVVPDQVDTI VPIENACVQQ
TEQGQYVFKP TSIESGRHIK PIGSDVKEGQ KLLSKGHVIR PQDQALLASV GIHQLSVFQK
VTLVIFTSGN ELISPGNSLK KGQIYDANAF LIESLCQRIP VDVIANERLE DDEEKIKHRL
AAWQGQVDVI LTVGGASVGE KDFIKTSLAS YPNFWTWKLN MKPGKPFSMA ISQQTSILAL
PGNPLAAFMT FQALATPFIQ KQAGIKEWQN KPAKRVLASD LKINNDRLIW CQVMETEQGV
TPILNASSSQ LMNLVESDGY IRINPGQNYQ AGDVVDFWGT P