Gene Tcr_1159 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1159 
Symbol 
ID3760646 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1260777 
End bp1263500 
Gene Length2724 bp 
Protein Length907 aa 
Translation table11 
GC content45% 
IMG OID637785883 
Productmolybdopterin oxidoreductase 
Protein accessionYP_391428 
Protein GI78485503 
COG category[C] Energy production and conversion 
COG ID[COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing
[COG1251] NAD(P)H-nitrite reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCGTC CCGTGTTTTT AAACCCTGAA GACGTCGAAA CAACCTGCCC TTATTGCGGC 
GTAGGGTGCG GTATGACGGT TTCTTCTAAA GCACCATCAA CCGAGAGTGA TTCGTTCGAA
GTCAAGGTTA AAGGTTCGCC ATCGCACCGG GCAAATTATG GCAAATTATG TGTTAAGGGC
TCCTCGGCAG GTGAAACAGT AGACTTTTCT GGGAGAATGC TACATCCACA GATTGATGGC
AACATCGTCG ATTGGGAAAC CGCACTGAAT GATGTAGCTA AGACCTTTCA GAAAACCATT
TCAGAATACG GTCCCGATTC CGTCGCATTT TATGTATCCG GACAGTTCTT GACGGAAGAT
TACTACGTTG CCAATAAATT GATTAAGGGA TTTATGGGAA CCGCGAACAT CGATACCAAT
TCCCGTCTCT GTATGGCCTC GGCGGTTGTA GGTTACAAAC GAGCGTTTGG CTCAGATACA
GTGCCTTGCT GTTATGAGGA TTTAGAGCAC GCCGATTTAA TTACATTGGT GGGATCAAAC
ACGGCATGGG CGCATCCCAT TATTTATCAA AGAATTGCGG CGGCTAAAAA GAAAAATCCG
AAACTGAAAA TTGTGGTGGT TGACCCGCGT AAAACGGCAA CTTGCGACAT TGCTGACCTT
CATCTAGCCA TTAAGCCAGG AATGGATGCC GCTTTATTCA ATGGTTTGTT GGCGTACCTT
AATCAGCAGA ATGCACTTGA TTTAGATTAT ATTCAAAAGC ATACCGAAGG ATTTGAAAGT
GCATTGCAAA AAGCAAATGA GCTGCAAGGC AATGTATCGG ATTTGGCGAC ACAATGCGAT
CTTAATGAAA CTGACCTGCG ACAGTGGCTA GATTGGGCAA CTTACACACC TAAAATGGTG
ACTATGTACT CGCAAGGTAT TAATCAATCA TCCTCTGGAG TGGATAAATC CAATGCCATT
ATTAACTGTC ATTTAGCAAC GGGCAGAATT GGGAAAGAAG GAATGGGACC GTTTTCGATT
ACCGGACAAC CCAATGCAAT GGGTGGGCGA GAAGTAGGGG GATTAGCAAA TCAGCTCGCG
GCGCATATGG ATTTTAGTGA CTCTGAGAAT ATCGATCGAG TGGCGCGTTT CTGGCAAGCC
GAAAACATGG CACAACAAAA CGGTTTAAAA GCGGTCGATT TATTCCACGC TGTGGGTGAG
GGAAAAATTA AAGCCATTTG GATTATGAAT ACCAATCCCG TTGTCTCTAT GCCGGATGCC
GATAATGTCA AACGCGCTCT GGAAAAATGT GACTATGTTG TGGTGCAAGA TTGCATGCAA
GACACTGATA CAACTCGAGT GGCTAACGTG TTACTTCCTG CCACAACCTG GGGGGAAACC
GATGGCGCCG TGACCAACTC CGATCGAACC ATTTCGATTC AAAGGCAATT TATGCAAGGG
CCAGAAAATG CCCGACCAGA TTGGTGGATT TTATCGGAAG TGGCTAAAAA AATGGGGTGG
GCTCATGCAT TCAATTATGA CTCCGCAGTG GATATCTTTA GAGAACACGC TCAGTTATCC
GGTTTTGAAA ATAATGGCTC ACGTGATTTT GATATTTCAG CATTTGCAAA CATTTCTAAA
CAAGAATATG CCCATTTCAA ACCGATTCAA TGGCCAGTAA ATGTATCGGC GCCGAACGGA
ACACAACGTA TGTTTTCAGA CGGTTGTTTT TTTACGCCAT CCAAAAAAGC GCAATTTATC
GCCATCACTC CTTATGCTCC CTTGAGTCAG CAAACAAAAG ACAAGCCTTA TGTATTGAAT
ACCGGACGTG TTCGGGATCA ATGGCATACG ATGACTCGTA CTGCTAAAAC AGCCAAATTG
ATGGCGCATA AAAATGAACC GTACATTACG CTTCACCCGG ATGATGCCCG TATCCAACGA
TTATCGGAAG GCGATTTGGT TAGAGTCTCA AATGAACTTG GACAGTTGAT TGGGCGGGTT
GAAGTCAGTG ATTCACAGCG CCGGGGTGAA ATTTTTGTCC CCATTCATTG GACCAGCCAA
TATGCCAGTC ATGGCCGGGT TGACAGTCTG ATCAAGGCCA ATGTTGATCC GCTTTCCGGG
CAACCAGAAT CAAAACACGC CACCGTCACA ATTGAGCGTT ATTCAGCTCA GTGGCAAGGG
TTTATTTTAA GCCGAACGGC GATTAATCCT GAATTGTTTG ACGATGACTA TTGGGTAAAG
ATTACGGGTA AACATTTTTA TCGCTATGAA ATTGCCAGTG AAAGAGCGAT TAAAAATGCC
CATGCCTGGG CGAAAACCAT ACTGTCTTCC TCAGAAAATA CAGAGTGGAT TGAATATGAC
GATGCCTCTT GTAAGCAATA CCGTGCTGCC TTAATCAAGA ACGATCAACT TCAAAAAGTA
TTTTTTATGG CGGAGGACCA TAAAATGCCC AGCCGAGATT GGTTGGGTCA CTTATTTTCA
GCCACGGAGC TTTCTCCTAT AGAGCGCCGC AGTTTACTGG CCGGTAAGGC GAGTGGCGCG
AAAGATCCAG GGCGAACAAT TTGTTCTTGT TTTGGTGTCG GAATTAACAC CATTATTGAA
GCGATTGAAG CACAAAATTT AGTCAGTGTA GAAGCCATAG GGCAAGCACT TAAAGCGGGG
ACAAACTGTG GTAGCTGTGT ACCGGAGTTA ACAGAAATTT TAGCGGTTGA ACTGAGCTTA
GACGTTTCTG AGAAAACAGG ATGA
 
Protein sequence
MNRPVFLNPE DVETTCPYCG VGCGMTVSSK APSTESDSFE VKVKGSPSHR ANYGKLCVKG 
SSAGETVDFS GRMLHPQIDG NIVDWETALN DVAKTFQKTI SEYGPDSVAF YVSGQFLTED
YYVANKLIKG FMGTANIDTN SRLCMASAVV GYKRAFGSDT VPCCYEDLEH ADLITLVGSN
TAWAHPIIYQ RIAAAKKKNP KLKIVVVDPR KTATCDIADL HLAIKPGMDA ALFNGLLAYL
NQQNALDLDY IQKHTEGFES ALQKANELQG NVSDLATQCD LNETDLRQWL DWATYTPKMV
TMYSQGINQS SSGVDKSNAI INCHLATGRI GKEGMGPFSI TGQPNAMGGR EVGGLANQLA
AHMDFSDSEN IDRVARFWQA ENMAQQNGLK AVDLFHAVGE GKIKAIWIMN TNPVVSMPDA
DNVKRALEKC DYVVVQDCMQ DTDTTRVANV LLPATTWGET DGAVTNSDRT ISIQRQFMQG
PENARPDWWI LSEVAKKMGW AHAFNYDSAV DIFREHAQLS GFENNGSRDF DISAFANISK
QEYAHFKPIQ WPVNVSAPNG TQRMFSDGCF FTPSKKAQFI AITPYAPLSQ QTKDKPYVLN
TGRVRDQWHT MTRTAKTAKL MAHKNEPYIT LHPDDARIQR LSEGDLVRVS NELGQLIGRV
EVSDSQRRGE IFVPIHWTSQ YASHGRVDSL IKANVDPLSG QPESKHATVT IERYSAQWQG
FILSRTAINP ELFDDDYWVK ITGKHFYRYE IASERAIKNA HAWAKTILSS SENTEWIEYD
DASCKQYRAA LIKNDQLQKV FFMAEDHKMP SRDWLGHLFS ATELSPIERR SLLAGKASGA
KDPGRTICSC FGVGINTIIE AIEAQNLVSV EAIGQALKAG TNCGSCVPEL TEILAVELSL
DVSEKTG