Gene Tcr_1146 details

Gene Information

• Locus tag: Tcr_1146
• ID: 3762134
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thiomicrospira crunogena XCL-2
• Kingdom: Bacteria
• Replicon accession: NC_007520
• Strand: +
• Start bp: 1242679
• End bp: 1243266
• Gene Length: 588 bp
• Protein Length: 195 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 637785867
• Product: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
• Protein accession: YP_391415
• Protein GI: 78485490
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0558] Phosphatidylglycerophosphate synthase
• TIGRFAM ID: [TIGR00560] CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.00000000000888474
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACATTAC AATCTTTACC TATGATCATG ACCTGGTCTC GAGTCGCCTT AATCCCGGTT 
TTTTTAGTCT GTTATTACGC CCCCATAGAG GATGCCCGCT TTTGGGCTGG CTTGGCCTTT 
ATGATTGCGG CCATTACCGA CTGGTTTGAT GGGTATTTAG CCAGAAAACT GAATGTCAGT 
AGTAAGCTGG GGGCTTTCTT GGACCCAGTG GCGGATAAAT TGATTGTTGC GGCTGCTTTG 
ATTGTGGTGT CGGTTGAATA TCAGAATATT TGGGTGACGT TGTCTGCCAT TGTGATTATG 
ATGCGAGAAA TCAGTATTTC AGCCTTAAGA GAATGGATGG CGGAAAACAA TGCTCGTGAT 
GTCGTGGCCG TTTCCAGCTT AGGAAAAATC AAAACTGCTT CACAACTGGC CGCATTGACA 
TGGTTGTTGT ATGGCGGCGA GCTTTGGGGC GTTGACTGGG GAACTTTAGG CTTCCCTATG 
CTGTATTTTT CAGCGGTGCT AACGGTTATT ACATGGTATC AATATGGGCG CGCTGCCTTG 
CCTGTGATGC TTGAAACGGT ATCGGATGAA ACAAAAAAGC CATCATAA 

 

Protein sequence

MTLQSLPMIM TWSRVALIPV FLVCYYAPIE DARFWAGLAF MIAAITDWFD GYLARKLNVS 
SKLGAFLDPV ADKLIVAAAL IVVSVEYQNI WVTLSAIVIM MREISISALR EWMAENNARD 
VVAVSSLGKI KTASQLAALT WLLYGGELWG VDWGTLGFPM LYFSAVLTVI TWYQYGRAAL 
PVMLETVSDE TKKPS