Gene Tcr_1137 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1137 
Symbol 
ID3762125 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1229895 
End bp1231292 
Gene Length1398 bp 
Protein Length465 aa 
Translation table11 
GC content43% 
IMG OID637785858 
Productadenylosuccinate lyase 
Protein accessionYP_391406 
Protein GI78485481 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0015] Adenylosuccinate lyase 
TIGRFAM ID[TIGR00928] adenylosuccinate lyase 


Plasmid Coverage information

Num covering plasmid clones49 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAACTTT CAGAATTGAC CGCTATTTCG CCTATTGATG GACGTTATGG CGCACGTTTA 
TCAAGCTTAA AAGAAATTTT CAGTGAATAT GGTTTGATTA AAAACCGTGT TAAGGTTGAA
GTCTCTTGGT TACGTATGCT GGCAAACCAT CCTGGGATTC CAGAAGTACC GCCGCTGAGT
TCTGACGCTG AAAACCACTT ACTGAAGTTG GTGGATGAAT TTTCTTTGGA AATGGCACAA
CGTGTTAAAG ACATTGAACG CACCACAAAC CATGATGTGA AAGCGGTTGA GTACCTAATC
AAAGAACATT TTGGTGACAA TGCCGAATTG AATGCGATTG GCGAATTTGT TCACTTCGCT
TGTACGTCAG AAGACATTAA CAACCTGGCT TATGCATTAA TGCTGAAAGA TGCTCGTGCC
ACGGTAATCG TGCCTGAAAT GCAAACGTTG GTTGATAAAA TTTCAGGAAT GGCTACTGAA
ATGGCTGACA TTCCAATGAT GTCTCGTACA CATGGCCAAC CGGCCTCTCC GACGACGGCC
GGGAAAGAAT TTGCCAATGT AGCGTATCGT TTACAACGCC AAATCAAACA GCTAATGAAT
GTTCAAATCA TGGGTAAAAT CAATGGTGCA ACGGGTAACT ACAATGCACA CCTTGCCGCG
TACCCATCCA TCAACTGGTA TGAGTTGACT GAACAGTTCG TGCAAAGTCT AGGGTTGGCT
TGGAACCCAT ATACCATTCA GATTGAACCA CATGACTACA TTGCAGAATA TTTCCATACC
ATGCAGCGTT TCAATACGAT TTTGATTGAT TTCGATCGTG ATATCTGGAG TTATATTTCA
ATCGGATTCT TCAAGCAAAA AACCGTTGCG GGCGAGATCG GTTCTTCTAC CATGCCGCAT
AAAGTAAACC CAATCGATTT TGAAAACTCA GAAGGGAACT TAGGAATTGC CAACGCGATC
TTTGATCATT TAGGTCAAAA ACTACCGATT TCCCGCTGGC AGCGTGATTT AACGGATTCA
ACGGTGTTGC GTAACTTGGG TGTTGGGGTT GCACACACGA TGATTTCATT GCAAGCGACT
TTAAAAGGTC TGAACAAGCT GGATGTGAAT GCGCAAGCAA TGGCGGATGA CTTGGATAAT
AACTGGGAAG TCTTAGCCGA AGCAATCCAA ACGGTGATGC GTCGTTATGG CATCGAAAAG
CCGTATGAAA AATTAAAAGA GCTTACGCGT GGGCGTCGTG TGAATAAACA AATCATGCAA
GAGTTTGTGG ACACACTAGA ACTGCCAGAA GAAGCGAAGC AGAGCTTAAA ACAAATGACC
CCTGCTTCCT ATATTGGGAA TGCCGCGCAA CAAGCACAGA ACATTGAATT GGCCTTAACC
ATGTTAAAAG GTCGTTAA
 
Protein sequence
MQLSELTAIS PIDGRYGARL SSLKEIFSEY GLIKNRVKVE VSWLRMLANH PGIPEVPPLS 
SDAENHLLKL VDEFSLEMAQ RVKDIERTTN HDVKAVEYLI KEHFGDNAEL NAIGEFVHFA
CTSEDINNLA YALMLKDARA TVIVPEMQTL VDKISGMATE MADIPMMSRT HGQPASPTTA
GKEFANVAYR LQRQIKQLMN VQIMGKINGA TGNYNAHLAA YPSINWYELT EQFVQSLGLA
WNPYTIQIEP HDYIAEYFHT MQRFNTILID FDRDIWSYIS IGFFKQKTVA GEIGSSTMPH
KVNPIDFENS EGNLGIANAI FDHLGQKLPI SRWQRDLTDS TVLRNLGVGV AHTMISLQAT
LKGLNKLDVN AQAMADDLDN NWEVLAEAIQ TVMRRYGIEK PYEKLKELTR GRRVNKQIMQ
EFVDTLELPE EAKQSLKQMT PASYIGNAAQ QAQNIELALT MLKGR