| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1134 |
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| Symbol | |
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| ID | 3762075 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | + |
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| Start bp | 1225545 |
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| End bp | 1227500 |
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| Gene Length | 1956 bp |
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| Protein Length | 651 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637785855 |
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| Product | ABC transporter related |
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| Protein accession | YP_391403 |
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| Protein GI | 78485478 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
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| TIGRFAM ID | [TIGR01288] ATP-binding ABC transporter family nodulation protein NodI |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTTTTG CGATTCAAGC AAATCGAGTC AGTAAGCACT ATCGAAAAAA AGTCGCATTC
GAAGATATTT CGATTGAAAT TCAGGCCGGT GAAATCTATG GTCTCATTGG CCCGGATGGC
GCGGGAAAAA GCTCGTTGAT GCAAGCCATT GCTGGAGTAT TAACGTATGA CTCAGGCGAT
TTGCGTGTTT TTGACTCTCC TGTTGACTTC GAAAAATCCG CAGAAAAAAT AAAACATCGC
ATTGGTTTTA TGCCACAAGG ATTGGGTTTG AACCTCTATC CGGATTTGAG CATTGAAGAG
AATATCGATT TCTTTGCGAA TTTAAGGGGG GTATCAAGTG ACGTGTTGCA GCAACGTAAA
GAGATGTTGT TGTCGGTTGC GAAGCTGACG TCTTTTAAAG CACGCCCCAT GAAAAACCTA
TCTGGTGGTA TGAAACAGAA ACTGGGTTTG GTGTGTACTT TAATACACCA GCCCGAATTA
ATCATTCTGG ACGAACCGAC TACGGGCGTG GACCCAATTT CTCGGCGAGA TTTTTGGGAA
ATGCTCAATC GTTTGGTGAT GGAAGAAGGA ATGACGGCCT TAGTTTCGAC TGCTTACATG
GATGAAGCCA GTCGATTTAA CCGCTTAAGC GTGATGCACC AAGGGAAGGT GCTTGAACAG
GGCAGTGCTG ATGAAATTGT TGCAAAATCA CCCGGTTGGG TAATTGAAAT CGAAACCACT
CAACCAAGTG ATGTTTTGGC TCTGCTTAAA ACCAAATTTG AAACGGTAGA ACAGTTAGGC
CAAATGGTTC GAGTGGTTGT CTTTGGCCAA GACAAAGATA CCATTGAATT GATTCTCAAA
GAACAGCTTG GTTCTGAAAA GGATGGTTGG TATTTTTTAC CGATCGGTTT GGAAGAATTT
TTTATTCACC ACTTGAAGAA CCATTCAACC TCGGCCGCCA AACAACTTCA GAACCCGTCT
GATATCATTT CTCAATCAGA TTCCGAAAAG AATAAAACAA ACACCGATGA ACCGCTGATT
CAAGCGGATA AGTTGGTTCG ACGATTTGGC GATTTCACGG CGGCGGATCA AGTAAGCTTT
GAAGTCAGGC CTGGTGAAAT TTTTGGGTTG TTAGGCGCTA ATGGGGCTGG TAAAAGTACT
GTCATTAAAA TGCTGACCGG CATTCTCCCC CCGACAGATG GGGCGGGGTT TGTTGCCAAT
CAGAATATGG CACATTCAGG CATGGCGATT AAAGAAAGCA TTGGCTATAT GTCACAGGCC
TTTTCGTTGT ACCTAGATCT AACAGTGTTG GAAAACATTA AATTGTTCGG TCGAATTTAT
GGTTTAAGCG GAAAAAAATT ACAAGAACGG ATTGATTGGG TAATAGATGT CGGGCATTTG
CAGTCAGTTC AAAACGAACC TGCTGGTAGT TTGCCGATGG GTAAAAGACA ACGGCTGGCG
TTAGGATGTG CATTAATCCA TCAGCCTAAA GTGCTTTTTT TAGATGAGCC GACTTCTGGA
GTTGACCCCA TTGGTCGTTC TGAATTCTGG CGTATTTTAG TAAACCTGGC CTCTGAGTGG
GGAGTGGCCA TTTTAATTAC AACGCATTAC ATGCTAGAGG CTGAACATTG CCACCGCTTA
GCTTTAATGC AAGCTGGGCG AATCGTCGCT TATGACACGC CGGTTAAATT GAAGCAGACT
CTCAAGCAGC GAAAAGGGCA GGTTTTGAGC GTGAAAGTCT CGCATCCCTA TCGTGCGTTG
TCCTGCTTGC AAAGGTCAGG TTATGACCAT CTTTCTTTGT TTGGGAATCG ACTTCAACTC
TTTTCTAAAA CAATTTCTAA AACAAAAAGC GATGTAATTA ATGTATTAAA AAACAACCAG
ATAGAGATAA AAGATACCAT GATACTTCAA CCTTCTTTAG AAGATGTTTT TGTTGATAGA
ATTGAAACGG CTCTCGCTAA ACATGAGCTC CGTTAG
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| Protein sequence | MRFAIQANRV SKHYRKKVAF EDISIEIQAG EIYGLIGPDG AGKSSLMQAI AGVLTYDSGD
LRVFDSPVDF EKSAEKIKHR IGFMPQGLGL NLYPDLSIEE NIDFFANLRG VSSDVLQQRK
EMLLSVAKLT SFKARPMKNL SGGMKQKLGL VCTLIHQPEL IILDEPTTGV DPISRRDFWE
MLNRLVMEEG MTALVSTAYM DEASRFNRLS VMHQGKVLEQ GSADEIVAKS PGWVIEIETT
QPSDVLALLK TKFETVEQLG QMVRVVVFGQ DKDTIELILK EQLGSEKDGW YFLPIGLEEF
FIHHLKNHST SAAKQLQNPS DIISQSDSEK NKTNTDEPLI QADKLVRRFG DFTAADQVSF
EVRPGEIFGL LGANGAGKST VIKMLTGILP PTDGAGFVAN QNMAHSGMAI KESIGYMSQA
FSLYLDLTVL ENIKLFGRIY GLSGKKLQER IDWVIDVGHL QSVQNEPAGS LPMGKRQRLA
LGCALIHQPK VLFLDEPTSG VDPIGRSEFW RILVNLASEW GVAILITTHY MLEAEHCHRL
ALMQAGRIVA YDTPVKLKQT LKQRKGQVLS VKVSHPYRAL SCLQRSGYDH LSLFGNRLQL
FSKTISKTKS DVINVLKNNQ IEIKDTMILQ PSLEDVFVDR IETALAKHEL R
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