Gene Tcr_1127 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1127 
Symbol 
ID3762068 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1216356 
End bp1216847 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content41% 
IMG OID637785848 
Productcyclic nucleotide-binding domain-containing protein 
Protein accessionYP_391396 
Protein GI78485471 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value0.871772 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAAATA TGACTGCTGC CGAATTGTTT GATTATTTTC AAGAGAACGC GATTTGTGAA 
TCATTAACGC GTCCAGATGT TGAAGTGATG AGCGAGTTTT TACAAGAAAA ACAATTGAAA
AAAGGCGATG TTATTTTCGA CATGGGCGAT GTGGGTGATT CCATGTTCTT TATTGTGAAA
GGAAAGGTGG CTTTTACCAC AACAGATGGG CAAGATGAAG CCGAAGTTGG CATACAAGGT
CCTGGTAATT TGATTGGAGA AATGTCATTC TTTGATCGAA AGCCTCGTAT GCTAAAAATG
ACAGCTAGGT CAAAAGAAGT GACGTTGTTA GAAATTAAAC GTCCGATGTA CGATCGTCTT
AAAGTCGAAC ATCCTTATAT TGCCGTGAAT CTGGTTGAAA ATGCGGTGGT GAGCTTGGAT
CACTTGGTGC GCGCACTGAG TCAGGATGTT TCTCATTTTG AACACTACAT GGTTGGATTC
GGGCGTCATT AA
 
Protein sequence
MLNMTAAELF DYFQENAICE SLTRPDVEVM SEFLQEKQLK KGDVIFDMGD VGDSMFFIVK 
GKVAFTTTDG QDEAEVGIQG PGNLIGEMSF FDRKPRMLKM TARSKEVTLL EIKRPMYDRL
KVEHPYIAVN LVENAVVSLD HLVRALSQDV SHFEHYMVGF GRH