| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1122 |
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| Symbol | |
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| ID | 3762063 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | + |
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| Start bp | 1210101 |
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| End bp | 1211588 |
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| Gene Length | 1488 bp |
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| Protein Length | 495 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637785843 |
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| Product | NusA antitermination factor |
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| Protein accession | YP_391391 |
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| Protein GI | 78485466 |
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| COG category | [K] Transcription |
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| COG ID | [COG0195] Transcription elongation factor |
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| TIGRFAM ID | [TIGR01953] transcription termination factor NusA
[TIGR01954] transcription termination factor NusA, C-terminal duplication |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAAGG AAGTTTTAGC AGTTGTTGAA ATCATGTCTA ACGAAAAAGG CGTGGAAAAA
GAAATTATCT TTGAAGCCAT TGAAGCGGCT CTAGCGACAG CAACTAGAAA AAGTCATAAT
GATGAAATTG ACGCCCGTGT TTCTATTGAT CGACATACGG GTGATTACGA AACTTTCCGT
CGCTGGGAAG TGATTGAAGA CGATGTCGAG ATTGAAGACC ACGTTGGTTG GTATATTCGC
CATATGGATG CGGTTGACAT TGAACCGCAT ATTGAGCCAG GTGAATTTAT TGAAGAACCA
ATGGAGTCGA TCGAATTTGG CCGTATTGGT GCGCAAACAG CGAAGCAAGT GATTATTCAA
AAAGTCCGTG AAGCTGAGCG TAAAAAAGTG GTCGAAGAAT ATTCGAAACG CATCGGAGAA
ATTTTAACTG GTCAGGTTAA GCGTATTGAT CGCGGTGATG TCATTCTGGA TTTAGGGGAT
AACGTGGATG CGGTCATTCC TCGTTCAGAA TTGATTAACC GCGAAAACTT TAAAATGGGC
GATCGTGTCC GTGCTTATGT TCAAGATGTT TCTTTCCGTC CTCGCGGCCC ACAGATTTTC
ATGTCTCGTG CGTGTAAAGA AATGTTGATG GAACTGTTTA AAATCGAAGT GCCTGAAATT
GGTGACGACT TAATCGACAT TATGAGTGCG GCTCGTGATG TTGGTTTAAG AGCCAAGGTG
GCCGTTCGTG CTAACGACCC ACGCTTAGAT CCTATCGGAG CTTGTGTCGG GATGCGTGGT
GGACGTGTTC AAGCGGTGAC AAATGAATTA AATGGAGAAC GTATCGACAT TATCCTTTGG
GATTCAAACG ATGCGCAGTT TGTTATTAAT GCGATGGCCC CAGCAGAAGT CACGTCCATT
ATGGTGGATG AAGACAAGCA TACAATGGAC TTGGCGGTTG ATGATGAGCA GTTGTCTCAG
GCCATTGGTA AAAACGGTCA AAACATCCGC TTGGCAACCG AACTAACAGG TTGGGAGCTG
AATGTCATGT CTGAAACGGA CATGGCTGCG AAGCATGAAA CAGAATCGAA AGGTCAGATG
GATTTATTCG TCAACGGCTT GGAAGTCGAT GAAGAACTTG CAGAAGTTCT AGTCGCAGAA
GGTTTTACAA CACTTGAAGA AGTGGCGTAT GTTCCGGCTG CGGAAATGTT AGAGATTGAA
GGCTTTGATG AAGAAATTGT TGCAGCTTTA AAAGAAAGAG CTAAAGACGC ACTGTTGACT
CAAGCAATTG CAAACGAAGA AAAGACAGCC ATGGCTGAAC CAGCGCAAGA TTTATTGGAC
TTAGAAGGCA TGACTGAAGA AATGGCAAAA ACGCTCGCTT CTAAAGGAAT CATCACTCAG
GAAGATTTAG CTGAATTAGG CACGGATGAA TTATTAGAAA TAGTAGAGAT GGATGCGGAC
GCAGCTAGCG AATTGATTTT GAAAGCACGC GCACCATGGT TTGAATAA
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| Protein sequence | MSKEVLAVVE IMSNEKGVEK EIIFEAIEAA LATATRKSHN DEIDARVSID RHTGDYETFR
RWEVIEDDVE IEDHVGWYIR HMDAVDIEPH IEPGEFIEEP MESIEFGRIG AQTAKQVIIQ
KVREAERKKV VEEYSKRIGE ILTGQVKRID RGDVILDLGD NVDAVIPRSE LINRENFKMG
DRVRAYVQDV SFRPRGPQIF MSRACKEMLM ELFKIEVPEI GDDLIDIMSA ARDVGLRAKV
AVRANDPRLD PIGACVGMRG GRVQAVTNEL NGERIDIILW DSNDAQFVIN AMAPAEVTSI
MVDEDKHTMD LAVDDEQLSQ AIGKNGQNIR LATELTGWEL NVMSETDMAA KHETESKGQM
DLFVNGLEVD EELAEVLVAE GFTTLEEVAY VPAAEMLEIE GFDEEIVAAL KERAKDALLT
QAIANEEKTA MAEPAQDLLD LEGMTEEMAK TLASKGIITQ EDLAELGTDE LLEIVEMDAD
AASELILKAR APWFE
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