| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1118 |
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| Symbol | |
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| ID | 3762059 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | + |
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| Start bp | 1205199 |
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| End bp | 1206857 |
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| Gene Length | 1659 bp |
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| Protein Length | 552 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637785839 |
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| Product | SSS family solute/sodium (Na+) symporter |
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| Protein accession | YP_391387 |
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| Protein GI | 78485462 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4147] Predicted symporter |
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| TIGRFAM ID | [TIGR00813] transporter, SSS family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.191913 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATTCG GATTTAAACA GTTATTAGCC TTAATGATTA TGATTGCGGC GCCGATTACT
GCTTATGCAG CAGGAATTGA TGTTGCAGCA CCTGTTGAAA AAGTCACTAA CTGGTCGGCT
ATTTCAATGT TTGTTATCTT TGTCGGGGCG ACTTTGTACA TCACCTACTG GGCGGCTCAA
AGAACCAAGT CTGCCAAAGA TTTCTATGCC GCCGGCGGTG GTATTACAGG TCTTCAGAAT
GGTTTAGCCA TTGCAGGTGA CTATATGTCT GCCGCGTCTT TCCTTGGGAT TACAGGGATG
GTTTACCTAA AAGGGTATGA TGGTTTGATT TTTGCCATCG GTTTCCTTGT TGGTTGGCCG
ATTATCCTTT TCTTGATGTC TGAACGTCTA AGAAACTTAG GGAAGTTTAC CTTTGCGGAT
GTGGCGGCTT ACCGTTTTCA ACAAACACCT ATCCGTGTTT TAGCGGCCTT TGGTGGGATT
GCAGTTGTTA TCCTGTATCT GATCGCGCAA ATGGTGGGTG CTGGTAAGTT GATCGAGCTT
CTATTTGGCT TGGACTTCAA CTATGCGGTT GTGATGGTCG GTGTCTTGAT TATTGCTTAT
GTATCATTTG GTGGTATGTT GGCAACGACT TGGGTGCAAA TCATCAAAGC GGTTCTGCTA
CTGTCTGGGG CGACATTCAT TGCCGTGGCC GTTATGTATA ACATGGGCTT CAGCTTTGAA
ACCTTGTTTA AAACAGCTGT AGAAAACCGT GGTAACAACA TGGATATTCT GTATTCGGGT
GGGTTTGTTT CCGATCCAAT TAATGCGATT TCGTTAGGGA TTGCCTTGAT GTTCGGTACC
GCTGGTTTAC CACATATCCT AATGCGATTC TTTACGGTTC CAGATGCAAA AGAAGCACGT
AAGTCGGTGT TCTATGCCAC TGGTTTCATC GGATACTTCT ACATTTTAGC TTTCATCATC
GGGTTCGGTG CGATTGCAAT GGTGGTTGCA TCTGAGTATA TGGATGGCTC TAAGTTGATT
GGTGGTAATA ATATGGCGGC AATTCACTTG TCTCATGTTA TTGGCGGTGA CTTCTTCCTA
GGCTTTATTT CTGCTGTGGC ATTTGCCACG ATCCTGGCGG TTGTCTCTGG TTTGACATTG
GCGGGTGCTT CTGCGATTTC ACATGATATT TATGCGAATG TGATTAATAA AAACGCAACA
GAAGAGCAAG AAACTAAAGT AGCGAAGTAT GCGACTCTCG TGATTGGTGC TTTGGCAATT
ATTTTCGGTA TCGGGTTTAA AGATCAAAAC ATCGCTTTCG TGGTGGCATT GGCCTTTACA
ATCGCCGCTT CGGCTAACTT CCCGGTTCTG ATTATGTCGA TGTTCTGGAG CAAGATGACG
ACACGTGGTG CCGTTATTGG TGGTTGGCTA GGGTTAATCT CTGCCGTTGT AATGGTTGTG
CTAGGGCCGG TTGTTTGGAC GCAAATCCTT TCAATGGGTG AAGCAATTGT ACCTTACAAG
TTCCCAGCAT TGTTCACGGT GATCATTGCC TTTGTAGGTA TCTGGTTCTT CTCTATCACG
GATAAATCCG CTAGAGCGAA GCAGGATCTT GAAGGATTTG AAGCTCAGTT TGTGAGATCA
CAAACAGGGA TTGGCGCTGA AGGCGCTTCA GACCACTAA
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| Protein sequence | MKFGFKQLLA LMIMIAAPIT AYAAGIDVAA PVEKVTNWSA ISMFVIFVGA TLYITYWAAQ
RTKSAKDFYA AGGGITGLQN GLAIAGDYMS AASFLGITGM VYLKGYDGLI FAIGFLVGWP
IILFLMSERL RNLGKFTFAD VAAYRFQQTP IRVLAAFGGI AVVILYLIAQ MVGAGKLIEL
LFGLDFNYAV VMVGVLIIAY VSFGGMLATT WVQIIKAVLL LSGATFIAVA VMYNMGFSFE
TLFKTAVENR GNNMDILYSG GFVSDPINAI SLGIALMFGT AGLPHILMRF FTVPDAKEAR
KSVFYATGFI GYFYILAFII GFGAIAMVVA SEYMDGSKLI GGNNMAAIHL SHVIGGDFFL
GFISAVAFAT ILAVVSGLTL AGASAISHDI YANVINKNAT EEQETKVAKY ATLVIGALAI
IFGIGFKDQN IAFVVALAFT IAASANFPVL IMSMFWSKMT TRGAVIGGWL GLISAVVMVV
LGPVVWTQIL SMGEAIVPYK FPALFTVIIA FVGIWFFSIT DKSARAKQDL EGFEAQFVRS
QTGIGAEGAS DH
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