Gene Tcr_1117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1117 
Symbol 
ID3762058 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1204894 
End bp1205199 
Gene Length306 bp 
Protein Length101 aa 
Translation table11 
GC content35% 
IMG OID637785838 
Producthypothetical protein 
Protein accessionYP_391386 
Protein GI78485461 
COG category[S] Function unknown 
COG ID[COG3162] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.130739 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGAACAGT CTAAAATTGA GAAGATCAAG AATCTTCCGG AATATCAACA GCTTGTTAAA 
GAGCGTACCG CATTAGCATG GGGACTTTCT TTGGCAATGT TGGTGGTTTA CTACGGTTAC
ATTTTGCTTT TAGCATTTGA TCCGGCATTT TTTACAACCA TTATTAGCGG TAGTTATGTT
TCGATTGGTT TTCCAGTTGG GATCGCAATC ATTATTTTTG CATTTTTATT AACGGGTTAT
TACGTTAAGA AAGCGAATGC GGATTTTGAT AAGTTAACAG CTAAAATTAA AAAAGAGGTT
GAATAA
 
Protein sequence
MEQSKIEKIK NLPEYQQLVK ERTALAWGLS LAMLVVYYGY ILLLAFDPAF FTTIISGSYV 
SIGFPVGIAI IIFAFLLTGY YVKKANADFD KLTAKIKKEV E