| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1115 |
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| Symbol | |
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| ID | 3760727 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | + |
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| Start bp | 1199083 |
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| End bp | 1202559 |
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| Gene Length | 3477 bp |
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| Protein Length | 1158 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637785836 |
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| Product | DNA polymerase III, alpha subunit |
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| Protein accession | YP_391384 |
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| Protein GI | 78485459 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.560519 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTCAAT TTGTACATCT TCATGTCCAT TCAGAATATT CGGTAGTCGA CTCGACTATT
CGAGTGAAGT CCGCTATTTC TCTTGCTCAA AAAAGTCAAC AGCCTGCGCT GGCATTAACC
GATCAGATGA ATATGTTTGC ATTGGTTAAG TTTTATACGG CGGCAATGGA TGCGGGCATT
AAGCCGATTA TAGGGTCTGA TTTATTGATT GAAGCCGAAG ATGGCAATGT CTTTAAAGTT
GTCTGTCTGT GTCAAAACGA TCAAGGTTAT CTGAATCTTT CACACTTGAT TTCAATGGCT
TACCTCAAGA ACCAAAAAGT GGTTCAAAAC GACATGAAAG CCTTAATCAA GCAAGAATGG
CTGGCTGAAT TCAATGAAGG CTTGATTATT TTATCCGGTG GTAAGGACGG CGATGTCGGT
CAGGCTATTT TGGCCGAAAA GCCGAATTTA GCCGCCAAAA GAGTTAGCTG GTGGGCGTCA
TATTTCCCGG ATCGTTTTTA TTTGGAATTG ATTCGTACCG GTCGAGATAA AGAAGAGCTA
TATATTGCGG GCGCAGTCGA TGTGGCTCAG CGATATGAGC TGCCTGTGGT GGCCACCAAT
GACATCCGTT TTGAACAAGC TGAAGACTTT GATGCGCATG AAGTGCGGGT ATGTATTCAC
GATGGCTATA TTCTGGATGA TCCGAATCGT CCGAAACGTT ATTCAGAAGA GCAGTATTAT
CGCAGTTCGG AAGAAATGGT TAAGCTGTTT GAAGACATCC CGGAAGCGAT TGAAAATACA
GTGGAAATCG CAAAACGTTG TAATGTCTCC CTGACACTGG GCACCTATTT TTTACCTGAC
TTTCCCGTTC CAGAGGGGTT GACGCTGGAT GAATACTTTA TTTTAGAGTC GCAAAAAGGC
TTGGATGAGC GTTTGAACTT TTTGTTTGGT GATTTATCAC CTGAGGCATT TGCTGAAAAA
CGAAAGGCCT ACGATGATCG ACTTAAGTTT GAGTTGGATA TCATTACCCA AATGGGGTTC
CCCGGTTATT TCTTTATCGT TGCCGACTTT ATCCAGTGGG GAAAAAACCA TCAGGTGCCG
GTTGGGCCTG GGCGAGGTTC CGGGGCCGGG TCATTGGTGG CGTATGCGTT AAAGATTACC
GACTTGGATC CGCTGGAATA TGACTTACTT TTCGAGCGTT TTTTGAATCC GGAAAGGGTT
TCAATGCCCG ATTTCGACGT CGATTTCTGT ATGGAGCGTC GTGATGAGGT GATTGATTAC
GTTGCTCGTC AGTATGGTCA GGATCATGTG TCGCAGATCG TAACGTTTGG AACCATGGCC
GCCAAAGCCG TGGTTAGAGA TGTTGGGCGT GTGTTAGGAA ATGGTTATGG CATGGTGGAC
AGTATTGCCA AGCTGATTCC AAACGACTTG GGGATTAAGC TGCAAGGAGC CTTGGACCAA
GAAGAACAAT TGCAAGAACG GTATGACAAT GAAGAAGATG TCCGTCTTCT GATCGATTTA
GCGTTGAAAT TAGAAGGCAC CGTTCGTAAT ACCGGGAAGC ATGCCGGAGG GGTGGTCATT
GGTCCTAAAC CGTTGGATCA TTTTTGTCCG GTTTTATGTG AACCTGATGG AAGCAGTGTC
GTCACTCAGT TGGATAAGAA TGATGTTGAG ACCGCAGGCC TGGTTAAATT TGACTTTCTG
GGACTCAGAA CCCTGACTAT TATTGATTGG GCGTTGCACT TTATCAACGA AGGCAAGCAA
CCTGGCGACG AAGGGTTTGT TGAAATTGAA CGGATTCCAT TGGATGATTC GCAAACGTTT
GATTTAATTA AAACCGGGAA AACAACCGGG GTCTTCCAGT TAGAGTCTTC CGGGATGCAG
AATCTGATTG TACGCTTACG CCCAGATTGC TTTGAAGACA TCATCGCCTT GGTGGCACTA
TTCCGCCCAG GACCGCTTGA ATCTGGAATG GTCGACAACT TTATCGCTCG TAAGCACGGT
AAAGAAAAAG TGTCTTATCC GGATGCTCAA TATCAACACG ACTCATTAAA AACCATCTTA
GAACCCACAT ATGGGGTTAT CTTGTACCAA GAGCAAGTTA TGCAGATTGC TCAGGTACTC
GCCGGCTATA CACTCGGTGG CGCTGATATG CTTCGTCGAG CCATGGGGAA AAAGAAGCCC
GAAGAAATGG CGAAGCAGCG TTCCATCTTT AAAGATGGGG CGATCAAAAA TAACGTCGAT
GGCGATTTGG CCATGAAGAT TTTTGATTTG GTGGAAAAAT TCGCCGGATA TGGGTTTAAC
AAATCCCACT CGGCCGCGTA TGCCTTAGTC TCTTATCAAT CTGCTTGGTT GAAAACACAT
TATCCCGCTG AGTTTATGGC AGCGCAGATT TCCTCGGATA TGGATAACAC TGATAAAGTG
GTTCATATGG TAAATGAGTG TTACGCGATG GGAATTGATG TCGCGCAACC GAGTATCAAT
GAGGGTGAAA TTCATTTTAA AGCCATTCGT GGGCAAAAGG CCGTCCGTTA TGGGTTGGGC
GCCATTAAAG GTGTCGGGGA ATCGGCTTTA GAAGGAATTG TTGCGGAGCG CAAACAAAAT
GGACCTTATC AAGATTTATT TGATTTTTGT TTACGTGTGA CTCGAAAAGT GAATAAGCGC
GTGATTGAAG CTTTGATTTC TGCCGGGGCG ATGGACTGTA TCCACAATAA TCGTCAGGCA
ATGTTAGACA GTGTCGGCAT GGCATTGCAA AAAGCCGAAC AAAAACAAAA AGATGAAGAA
GCCGGGCAAA CCGATTTGTT TGGCGATGTG ACCTCTTTTG AGGCCGAGAA TGAATCCAAA
CTGGTTGATG TGCCAGAAAT GCCTGAAAAA CTCCGTTTGA AAGGGGAGAA GGATGTATTA
GGTCTTTACA TGACCGGGCA TCCGATTGAA ATTTACCGTG AAGAGCTGGA CAAGATGGTT
GAACAGAAAC TGTCTGCGCT GCGCCCAGAA AAATGGAATA AAAAATGGGC CGCGGGTCTG
ATTGTCGAAG CACGAAATAA AGTTACTCGA AACGGCAGTC GAATGGGGTT TCTTGCGATA
GACGATCAAA CGGCTCGCCT GGATGTGGTG CTAAGACCGG CGGTGTTTGA GGCTTGTCGT
GACATTTTAA TTCCCGATAC CGTTATTCTG GTTTATGGCG AGGTAGCAGA AGATACATTT
AATGGCGGTA TCAAACTCGA TGCGGAGCAA GTGGTTACGC TGGCGGAATC CAGAGCGGAA
AAAGCCAGAG CGATTAAGCT TTTTGCAGAC GACTCTTTGG CCGTCAATCG AATTCAAGAA
TTATCAACTG TGCTGGCTCA TTACACTTCG GAAGAAGGGT TGCCGCTCGT GATTGATTAT
CAAAATGGCG CTGCACGCGC GCAAATGATT ACGGAAGACG GGGTGTCTTT TTTTCCTGAT
GATGAACTGT TAGAGGTTTT GAGGGGAAAT GGTTGGCGCC CCGAGGTGGT TATTTAA
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| Protein sequence | MSQFVHLHVH SEYSVVDSTI RVKSAISLAQ KSQQPALALT DQMNMFALVK FYTAAMDAGI
KPIIGSDLLI EAEDGNVFKV VCLCQNDQGY LNLSHLISMA YLKNQKVVQN DMKALIKQEW
LAEFNEGLII LSGGKDGDVG QAILAEKPNL AAKRVSWWAS YFPDRFYLEL IRTGRDKEEL
YIAGAVDVAQ RYELPVVATN DIRFEQAEDF DAHEVRVCIH DGYILDDPNR PKRYSEEQYY
RSSEEMVKLF EDIPEAIENT VEIAKRCNVS LTLGTYFLPD FPVPEGLTLD EYFILESQKG
LDERLNFLFG DLSPEAFAEK RKAYDDRLKF ELDIITQMGF PGYFFIVADF IQWGKNHQVP
VGPGRGSGAG SLVAYALKIT DLDPLEYDLL FERFLNPERV SMPDFDVDFC MERRDEVIDY
VARQYGQDHV SQIVTFGTMA AKAVVRDVGR VLGNGYGMVD SIAKLIPNDL GIKLQGALDQ
EEQLQERYDN EEDVRLLIDL ALKLEGTVRN TGKHAGGVVI GPKPLDHFCP VLCEPDGSSV
VTQLDKNDVE TAGLVKFDFL GLRTLTIIDW ALHFINEGKQ PGDEGFVEIE RIPLDDSQTF
DLIKTGKTTG VFQLESSGMQ NLIVRLRPDC FEDIIALVAL FRPGPLESGM VDNFIARKHG
KEKVSYPDAQ YQHDSLKTIL EPTYGVILYQ EQVMQIAQVL AGYTLGGADM LRRAMGKKKP
EEMAKQRSIF KDGAIKNNVD GDLAMKIFDL VEKFAGYGFN KSHSAAYALV SYQSAWLKTH
YPAEFMAAQI SSDMDNTDKV VHMVNECYAM GIDVAQPSIN EGEIHFKAIR GQKAVRYGLG
AIKGVGESAL EGIVAERKQN GPYQDLFDFC LRVTRKVNKR VIEALISAGA MDCIHNNRQA
MLDSVGMALQ KAEQKQKDEE AGQTDLFGDV TSFEAENESK LVDVPEMPEK LRLKGEKDVL
GLYMTGHPIE IYREELDKMV EQKLSALRPE KWNKKWAAGL IVEARNKVTR NGSRMGFLAI
DDQTARLDVV LRPAVFEACR DILIPDTVIL VYGEVAEDTF NGGIKLDAEQ VVTLAESRAE
KARAIKLFAD DSLAVNRIQE LSTVLAHYTS EEGLPLVIDY QNGAARAQMI TEDGVSFFPD
DELLEVLRGN GWRPEVVI
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