Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_1112 |
Symbol | |
ID | 3760724 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | + |
Start bp | 1195502 |
End bp | 1197748 |
Gene Length | 2247 bp |
Protein Length | 748 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637785833 |
Product | AAA ATPase |
Protein accession | YP_391381 |
Protein GI | 78485456 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
TIGRFAM ID | [TIGR02639] ATP-dependent Clp protease ATP-binding subunit clpA |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0000319586 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTAAGTA AAGAATTACA GCTCACTCTG AGTAACGCCT TTAGTTTGGC AAATGAGTAT GAGCATGAAT ATGTCACCCT AGAGCACTTG CTATTAGAAT TGCTTGGGTT GCCATCGGTG CGTGAAGCGA TTGAAGCCTG TGGTGTCAAA CTGACCACCA TTGAATCGGA GCTGGAAAAG TATCTCGACG GTGAAGCCGC AGGCATCAAG ACAGAAGAGT TGTTGCCTAC CATGGCTTTC CAGCGCGTGA TTGAGCGTGC GATTTATTTA GTGCAGTCGA ATGGCTATAC CGAAGTGACA GGGTTGCACG TTCTGGCGTC TATTTTCTCT GAGCAAGATT CTCATGCCGT TTATGTGTTG GAAAGCTGTG GTGTGCACCG TGTGGATATT TTAAGTTATA TCTCGCATGG GGTGACCGCT CAGCAACAAG AAGACTTTTT GACGTCTTCT CCCTCTGAGG AATCGATTGA AGATGCTGAA GCGGGTGAGT CTGAAAACAA TCCAATAACC AATTACAGTG TTAATCTCAA TGAAGAAGTT GAGATGGGGC GCATTGATCC AATTATTGGA CGCGAATGGG AATTGACTCG AACATTAGAA GTTTTGAGTC GACGTCGTAA AAACAATCCT TTACTGGTCG GAGAGCCGGG TGTCGGGAAA ACCGCCGTAG CCGAAGGGTT AGCGCATCGC ATTGTTGAGA AGAAAGTGCC TGAGCAGTTA ATGGATGCTG AAATCTTTAG CTTGGATATG GGAGCTTTGT TGGCGGGGAC GCGTTATCGA GGTGACTTTG AAAAGCGTTT CAAGGCTTTA TTGAAGGCAT TGGAAGAGCG GCCGCATGCG ATTCTGTTTA TTGATGAAAT TCATACCATT GTTGGTGCCG GCGCTGTTCA AGGTGGCGCC ATGGATGCAT CTAACTTAAT GAAACCGGCG TTGTCATCGG GTAAATTACG CTGTGTTGGT GCAACAACGT ATGAAGAATA TCGTGGTATT TTTGAAAAGG ATCGTGCTTT GGCACGCCGT TTCCAAAAAA TTGATGTGCA TGAACCGACT ACCCAGGAAA CGTTTGAAAT CCTAAAAGGA CTGAAGTCGC AATTCGAAAG TCATCACCAT GTGAAATATA CCTTACCGGC TTTAAAAATG GCGGTGGATT TATCTGCACG CTACATCAAT GATCGTCATT TGCCAGATAA GGCCATCGAT GTGATTGATG AAGCCGGGGC CAAACAGGCG CTGATGCCGA AAAGCAAACG CAAAAAACAA ATCTCTGTTG CTGAAATTCA GCAAATTGTA GCGAATATCG CGCGTATTCC TGTGTCGCAG ATTACCCAGA AAGAAAAAGA TAAGTTGATG AACTTGGAAG AAAGTTTGCA ACGAGTGGTC TTTGGTCAAG ATGAAGCGGT GCACAGCGTC GTCTCCGCAA TTAAGTTGGC TCGATCAGGA CTGAATGAGG GTGATCGTCC GACAGCTTCT TTCTTGTTTG CCGGCCCGAC CGGTGTGGGG AAAACAGAGT TAACTCAACA GTTGGCGAAA CACCTCGATA TTGAGCTGCT ACGGTATGAC ATGTCTGAAT ACATGGAGCG TCATTCCGTT TCTCGTTTGA TTGGTGCGCC GCCGGGCTAC GTTGGTTTTG ATCAAGGTGG TTTATTAACG GAAGCCGTTA ATAAACACCC ACATTCTGTT GTTTTATTGG ATGAGATTGA AAAAGCGCAT CCAGATGTCT TTAACCTGTT GTTGCAGGTG ATGGATAATG GGACTTTAAC AGACAATAAT GGACGCAAAG CTGATTTTAG AAATGTCATT TTGATTATGA CGTCGAATGT CGGAGCAGAA GCCGCGTCAC GAGCCAGTAT CGGGTTTGCA GTACAAGATC ACAGTCTGGA CTTCCAAGGG GAATTGAAAA AAGTGTTTAC GCCCGAGTTC CGTAATCGCC TGGATGGTGT GGTTCAGTTT AATCGCTTGT CTCCTGAAGT GATGAACTCT GTCGTGAATA AATTCATTTA TGCGCTTGAA AACAGTTTGC AAGACAAAAA AGTGTCAATT AAATTAACGG CCTCGGCACG TGAATGGCTG GCAAAAGAAG GTTATGATCC ATTTATGGGC GCTAGACCAA TGTCTCGTCT GGTTCAAGAA AAGATCAAAC AGCCTTTGGC TGAGATGTTG TTGTTTGGTG AGCTTCAATC CGGTGGTGAA GTGGTGATTG ATGCCGATGA ATCCGGTATT GTGCTGCACG CTGAGGAGTT GGTTTAA
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Protein sequence | MLSKELQLTL SNAFSLANEY EHEYVTLEHL LLELLGLPSV REAIEACGVK LTTIESELEK YLDGEAAGIK TEELLPTMAF QRVIERAIYL VQSNGYTEVT GLHVLASIFS EQDSHAVYVL ESCGVHRVDI LSYISHGVTA QQQEDFLTSS PSEESIEDAE AGESENNPIT NYSVNLNEEV EMGRIDPIIG REWELTRTLE VLSRRRKNNP LLVGEPGVGK TAVAEGLAHR IVEKKVPEQL MDAEIFSLDM GALLAGTRYR GDFEKRFKAL LKALEERPHA ILFIDEIHTI VGAGAVQGGA MDASNLMKPA LSSGKLRCVG ATTYEEYRGI FEKDRALARR FQKIDVHEPT TQETFEILKG LKSQFESHHH VKYTLPALKM AVDLSARYIN DRHLPDKAID VIDEAGAKQA LMPKSKRKKQ ISVAEIQQIV ANIARIPVSQ ITQKEKDKLM NLEESLQRVV FGQDEAVHSV VSAIKLARSG LNEGDRPTAS FLFAGPTGVG KTELTQQLAK HLDIELLRYD MSEYMERHSV SRLIGAPPGY VGFDQGGLLT EAVNKHPHSV VLLDEIEKAH PDVFNLLLQV MDNGTLTDNN GRKADFRNVI LIMTSNVGAE AASRASIGFA VQDHSLDFQG ELKKVFTPEF RNRLDGVVQF NRLSPEVMNS VVNKFIYALE NSLQDKKVSI KLTASAREWL AKEGYDPFMG ARPMSRLVQE KIKQPLAEML LFGELQSGGE VVIDADESGI VLHAEELV
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