| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1108 |
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| Symbol | |
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| ID | 3760720 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | + |
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| Start bp | 1192029 |
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| End bp | 1193393 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637785829 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_391377 |
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| Protein GI | 78485452 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 45 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATATTC TAATTGTTGA TCCATCCAAA AGTTACCGGG AAGTTGTTAA GGAAATCTTG
TCGAATGAAG AGGTTAATGT CATTGAAGCG AAAAGCGGTC ATGAAGCCTT CACGTACTTA
AAGCATAAAA CCCCCAGCGC GATTAGTATC GCGCATGAGC TGGGTGATAT GGACAGTTTT
AAATTTTTAA AAACGGTTAA TTTAAATACG ATTTTATGCA ATGTTCCGAA GTTTTTATTA
ACCTCTAATG CCTCGAAAGA TTTTAAAAGA AAAGCCTATG ATGCTGGTTT TACAGAGATT
TTTGTTAAAT CGGATTTCCC AACTTTAAAA CGCGCTTTAA AAAGCTTGAT GCTCTATGCC
ACGATGAATA TTTCTGCAAA AGTGCTGTAT GTGGAAGACA CGCAAAGCAC CGCAGACTAC
ACCAGTCATA TTATGTATTC TGCTGGTTGG GAAGTTGATC ATGTTAAAAG CGGAGAAGCG
GCGGCGGAGT TGTTGGATAA GCGTAAAGGG CATTATGATT TAGTGGTCAC TGACTTGGTA
TTGGAAGGTA ATGTGAGCGG TATTGGCTTG ATAAACTTGA TTCGGCAAGG GCATGAAAAC
ATTCGAGATA TTCCAATACT CGCTGTGTCA GGTTGGAATG ATTTATTACG ACAAGTTTAT
GTTCTAAAAC ATGGTGCTGG GGATTTTATT GCCAAACCCT TTCATGAAAC AGACTTTTTG
GCGCGTGCCA TTAATTTAAT CTTGAATAAA AAACATTTAG ACACCGTTAA AAGTGCTAAG
AAGGCGCTGT ATTTAAAAGC GAATATAGAT GCCGCGACGG GTCTGAATAA CCGGCATTAT
ATGGAAGAGT ACGGTGAAAA AATGGTGGCT GACTCCTGTG GGCGCAATGA AGGGATTACA
CTTGCATTGG TCGATATTGA TCATTTTAAA AGCGTCAATG ACTCGTTAGG GCATGCTTCA
GGAGATGCGG TATTAAAGCA AGTCGCCAGT TTAGTGAAAA GTCATTGCCA TTCAAATGAT
CTGGTGATCC GTTATGGCGG AGATGAATTG CTTATTTTAA TGACGGATGT TGATCAGGCA
TTAGCGACTG AGCGTCTTGA AATGATCCGA ATAGATGTTG CACGGTTGAA TCCGGTCAAT
GTGCCGGTAA CGGTTACCAT TGGCGCCGCT TCTTGTGATA AGAAAACGAA ACCAGAGTTG
ATGCAGTTAC TCAAAAGCCA AAATGGTGAT GCGGATAATG TGAGTGTGGA CTTGAAAACC
TTATTTAAAA CGGCGGATGA TTCACTTTAT ATGGCAAAGC AATCAGGAAG AGATCAGGTG
TGTGTGAATT CGCTCATGTC GGTTAATCAT CCGGAAGCAG AGTGA
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| Protein sequence | MNILIVDPSK SYREVVKEIL SNEEVNVIEA KSGHEAFTYL KHKTPSAISI AHELGDMDSF
KFLKTVNLNT ILCNVPKFLL TSNASKDFKR KAYDAGFTEI FVKSDFPTLK RALKSLMLYA
TMNISAKVLY VEDTQSTADY TSHIMYSAGW EVDHVKSGEA AAELLDKRKG HYDLVVTDLV
LEGNVSGIGL INLIRQGHEN IRDIPILAVS GWNDLLRQVY VLKHGAGDFI AKPFHETDFL
ARAINLILNK KHLDTVKSAK KALYLKANID AATGLNNRHY MEEYGEKMVA DSCGRNEGIT
LALVDIDHFK SVNDSLGHAS GDAVLKQVAS LVKSHCHSND LVIRYGGDEL LILMTDVDQA
LATERLEMIR IDVARLNPVN VPVTVTIGAA SCDKKTKPEL MQLLKSQNGD ADNVSVDLKT
LFKTADDSLY MAKQSGRDQV CVNSLMSVNH PEAE
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