Gene Tcr_1105 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1105 
Symbol 
ID3760717 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1188620 
End bp1189423 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content42% 
IMG OID637785826 
Producthypothetical protein 
Protein accessionYP_391374 
Protein GI78485449 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG4067] Uncharacterized protein conserved in archaea 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAGTTA ATCACGCACT TTGGGGTGTT TTCTTACCGG TCTTTTTGGG GCTAAGCGGT 
TGCCTTCCGT CAGAGATGAC TGTGAAAAAA GCACAGTTGG ATTCAATAGA CCAGCGCTTG
GCAAAGCTGG ATCAAACATT AATTCAACGA GATCAAGAAC ATTTTAAACT GGTGGGTGAT
TACCAAACGT CGGTTGCAAA ACAACAAGCG GTGCTGAAAA AAATTGAAGC AGACGTGTCT
GCACTGAAAA AACAAGTGGC CGCTGAAGCA GAAAGTCGTG CGGCAAAATC GACGCGAACT
CGGCCGACAG ACACGAAGCA GATTAAGAAT CAATCGGGTT ATTCGTATGT GGGTGATAAA
TTGTTAATTG GTGAAATTGA AGATGTGTAT TTAAGTCCTG TTAACTTAGA GCTTGAAGCG
CGGATTGATA CAGGGGCCCA AACCTCTTCT TTAGATGCTC AGAATATGAA AGTATTCGAG
CGTGATGGTA AAGAGTGGGT AAAATTCAAT TTTGTCGACC GTCAAACCAA AGAGGTACAT
GAGATCGAAC GGCCTGTGAG TCGGTTTGTG TTGATTATTC AATCGAATAC GCAAGAGAAG
GAACGTCGAC CAGTCGTAGC CTTTAATTTA ACCATTGGTA ATGTGTCTCA AGTGGTTGAG
TTTACGCTGA CCGATCGTTC TCATTTAGAT TTTTCAGTAC TGATCGGCCG AAATGTATTA
AAAGATTTAA TGCTGGTCGA TATCAGTCAG CAAAAAATTG CCCCTCCTGA AGTTTCATCT
TCGCAAAAAG AGGGCGTTCA TTAA
 
Protein sequence
MKVNHALWGV FLPVFLGLSG CLPSEMTVKK AQLDSIDQRL AKLDQTLIQR DQEHFKLVGD 
YQTSVAKQQA VLKKIEADVS ALKKQVAAEA ESRAAKSTRT RPTDTKQIKN QSGYSYVGDK
LLIGEIEDVY LSPVNLELEA RIDTGAQTSS LDAQNMKVFE RDGKEWVKFN FVDRQTKEVH
EIERPVSRFV LIIQSNTQEK ERRPVVAFNL TIGNVSQVVE FTLTDRSHLD FSVLIGRNVL
KDLMLVDISQ QKIAPPEVSS SQKEGVH