Gene Tcr_1099 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1099 
Symbol 
ID3760711 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand- 
Start bp1181351 
End bp1182490 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content45% 
IMG OID637785820 
ProducttRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 
Protein accessionYP_391368 
Protein GI78485443 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain 
TIGRFAM ID[TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAACAT CAAAACAAGA CAATTCAAAC ATTAAAGTCA TCGTCGGACT GTCCGGCGGT 
GTGGATTCTT CCGTCACGGC CTTGTTGCTT AAGCAGCAAG GTTATGATGT GGAAGGATTA 
TTCATGAAAA ACTGGGAAGG CGATGACACC GAAGATTATT GCCCGGCCGC TGAAGATTTA 
AAAGACGTTT TAGCCATATG TGAGAAACTC GACATTCCGT TGCACGTGGA AAATTTTTCA 
GGTGAATATT GGGATCGGGT TTTTGAACAC TTCCTTGCAG AATACCAATC AGGTCGAACG 
CCCAATCCTG ATATCCTGTG TAATAAAGAA GTGAAATTCA AAGCTTTTTT AGAGCATGCC 
ATGACATTGG GTGCCGATTA TATTGCCACC GGTCATTATG CTCGTATCAG CCGAGACGAA 
AATGGACAAT GCTATTTATT AAAAGGGCTG GACAACAATA AAGACCAAAG CTATTTTCTT 
TACACGCTGC AGCAGCACCA ATTATCGAAA TCCATGTTCC CGATTGGCGA ATTGGAAAAG 
CCTTACGTTC GACAGTTAGC CGAAGAAGCG GACTTGATCA CGCATGATAA AAAAGACAGT 
ACCGGAATCT GTTTTATCGG AGAACGTAAG TTCAAAGATT TCCTACAGCA GTTTTTACCG 
GCTCAACCGG GTGACATCGT CAACACCGAA GGCGAGGTTA TCGGTCATCA TGAAGGGTTG 
ATGTATCACA CGCTTGGCCA ACGAAAAGGC TTGGGCATTG GCGGTGGCTT TGGCGACTCT 
GGGTTGCCTT GGTTTTCGGC CGATAAAAAT CTGGAAACAA ATCAACTGAT TGCCGTACAA 
GGATCGGACC ACCCTTTATT GAACCATGCG TTTTTAACGG CCGACACCTG TGATTGGGTA 
TCTGGTCACT GCCCTGCATT AAAGCAAGCC TTGAAAGCCA AAGTCCGTTA TCGTCAACCG 
GAACAGCCTT GCCAAATCCT TTCTGAGAAG AATGGCGAGA TTATTGTACA ATTTGATGAA 
GAACAAACGG CTATTACACC CGGACAATCC GTCGTGTTTT ATGAGGGTGA AACCTGTTTA 
GGCGGTGCCA TTATTACCGG GCGCTACCAT TCTTTATCTG AAATCAACGA AGACAAGTAA
 
Protein sequence
MQTSKQDNSN IKVIVGLSGG VDSSVTALLL KQQGYDVEGL FMKNWEGDDT EDYCPAAEDL 
KDVLAICEKL DIPLHVENFS GEYWDRVFEH FLAEYQSGRT PNPDILCNKE VKFKAFLEHA 
MTLGADYIAT GHYARISRDE NGQCYLLKGL DNNKDQSYFL YTLQQHQLSK SMFPIGELEK 
PYVRQLAEEA DLITHDKKDS TGICFIGERK FKDFLQQFLP AQPGDIVNTE GEVIGHHEGL 
MYHTLGQRKG LGIGGGFGDS GLPWFSADKN LETNQLIAVQ GSDHPLLNHA FLTADTCDWV 
SGHCPALKQA LKAKVRYRQP EQPCQILSEK NGEIIVQFDE EQTAITPGQS VVFYEGETCL 
GGAIITGRYH SLSEINEDK