Gene Tcr_1096 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1096 
Symbol 
ID3760598 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1178318 
End bp1180234 
Gene Length1917 bp 
Protein Length638 aa 
Translation table11 
GC content43% 
IMG OID637785817 
ProductPpiC-type peptidyl-prolyl cis-trans isomerase 
Protein accessionYP_391365 
Protein GI78485440 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0760] Parvulin-like peptidyl-prolyl isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.21744 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTACAAA GCATTAGAAA TCACGCTCAA GGTTGGATAG CCTGGGTTAT TGTTGGATTG 
ATTATTCTGA CTTTTGCACT TTTTGGAATT GATCAGTACG CCAAAGGTGA CAAAATTATT
GTCGTTGCAG AAGTGAATGG AGAAGATGTC ACTGCCAATG AATTTTTAAC GCTTTACAGT
CGACAACAAG CCCGTCTTAA AAACCAGTTT GGTGAAATGT ATGATCAGGT GGTAAAAGAC
CAGCAGTTGC GCGATGAAGT GATGGATGCT TTGATTGAAT CCGAAGTGGT TCGTCAGTGG
GCCGATTCGC ATAACATGAT GATTTCAAAC CAACAGCTTT CAGCCACGAT CGAATCGGCT
GAAGTGTTTC AGAAGGACGG TCAGTTTGAC CAGCAACTTT ACCAAGACAT CTTGTTGCAA
AATGGGTTGA ATGTGGCTCG TTTTGAATAT GAGCAAAGAC AGTTCTTAAT TGAAAATCAA
AATCGTCAAC TGACAATGGC TTCGGCTATC ACAAACGACA CGCAGCTAGC ACAGCTCGCA
GCACTTCAGT TTCAACAGCG TAAAGTCAAT TATTTAAGAG TCGATCAGCG CCCGTTCATG
CAAGAGGCGC AAATCACAGA CGACGAAATT CAGACGTATT ACAACAAGCA TAAAGAAGAT
TTCATAACAC CTGAGCAAGT GGTGTTAAGT TATGTTTTGT TGTCAAAGAA AGACTTGGCA
GACAAAGTGA GTGTTGATGA CGCCATTTTG AAACGTTTTT ATCAAGATAA TAAAGATCAA
TTTACACAGC CTGAAAAACG TCAAGCGAGC CATATCTTGG TGAAAGTGGA TGCGGAATCG
CAAGACGCCG AAGCTCAAAA AACGATTAAA GAGATTCAAG CCAAGTTGGC AGACGGTGAA
GACTTTGCGG CATTGGCGAA AACGTATTCA GACGATCCTG GTTCAGCCAA CATGGGCGGT
GATTTAGGTC TTTTCCAACA GGGTATGATG GTTCCGGCAT TCGATAAAGC CGTGTTTTCA
ATGAAACTGA ATGAAATCAG TGACCCTGTT AAAACAGAGT TTGGTTATCA CTTGATTAAA
TTGACCAAAA TTCAACCTAA GAAAATGCAG GCATTCAATG AAGTAAAAGC CGAAGTCGAA
ACACTGTATC GTCGTCAGCA GGCGGACAAA CAGTATTTTG ATGAGTTAGA GCAGTTGAAT
ACGATCGCCT ATGAACAAGC GGATTCTTTG ATTCCAGCCG CCGATGCGGT TGGCTTGAAA
ATAGAAACCA CAGACCCTTT CTCACGAGTG GGTGGTGATG ATGAAATTAC CTCAAATGGC
AAAGTCATTA CGGCGGCGTT TTCTGAAGAA GTCAAAAAAT CAGGCCTTAA CAGCAGTGCG
ATTGAAATTT CACCTGATGT GTCCGTTGTT GTTCGCGTGA AAAAAGTGAT TGATGAAAAA
CAACAATCGT TAGCAGATGT AAAAGTCGAC ATTGAAAAAA TTCTGAAGCG TGAAGCGGGT
GTGAAAGCCT CGGCTGAACT TGCGAAAACA CTACGCGAGA AGCTTCTAAA GGGTGAGCAG
AAAATGGCTG ACCTGAAAAA AGACGGAGTG GAGTATTCCA ATGTCGGTTG GTTAGAGCGT
GAAAACCGTC GTGTTTTACC GCAGCTGACA CAAGCGATCT TTAAGGCACC GAAGCCGAAA
GAAGGGCAGC CAACTTATAC GACGTATGCT TTACCAACAG GTGATTCGGT TGTGATTGAA
GTATCGGACG TTAAAGAAGG TAACTTGCCG GACGATCAAT CGCAGTTAGC TCAAATGAAA
GCGGCTTTGG TTCAGTTGGC AGGGGTTTCT GAAGTTGATG CCCGTATCAA AGCGATGGTT
GCTGCAGCGG ACATTGAGCG TAAAGAAAAC TATAAAACGA TTAAGTCAGC AAGATAA
 
Protein sequence
MLQSIRNHAQ GWIAWVIVGL IILTFALFGI DQYAKGDKII VVAEVNGEDV TANEFLTLYS 
RQQARLKNQF GEMYDQVVKD QQLRDEVMDA LIESEVVRQW ADSHNMMISN QQLSATIESA
EVFQKDGQFD QQLYQDILLQ NGLNVARFEY EQRQFLIENQ NRQLTMASAI TNDTQLAQLA
ALQFQQRKVN YLRVDQRPFM QEAQITDDEI QTYYNKHKED FITPEQVVLS YVLLSKKDLA
DKVSVDDAIL KRFYQDNKDQ FTQPEKRQAS HILVKVDAES QDAEAQKTIK EIQAKLADGE
DFAALAKTYS DDPGSANMGG DLGLFQQGMM VPAFDKAVFS MKLNEISDPV KTEFGYHLIK
LTKIQPKKMQ AFNEVKAEVE TLYRRQQADK QYFDELEQLN TIAYEQADSL IPAADAVGLK
IETTDPFSRV GGDDEITSNG KVITAAFSEE VKKSGLNSSA IEISPDVSVV VRVKKVIDEK
QQSLADVKVD IEKILKREAG VKASAELAKT LREKLLKGEQ KMADLKKDGV EYSNVGWLER
ENRRVLPQLT QAIFKAPKPK EGQPTYTTYA LPTGDSVVIE VSDVKEGNLP DDQSQLAQMK
AALVQLAGVS EVDARIKAMV AAADIERKEN YKTIKSAR