Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_1096 |
Symbol | |
ID | 3760598 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | + |
Start bp | 1178318 |
End bp | 1180234 |
Gene Length | 1917 bp |
Protein Length | 638 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637785817 |
Product | PpiC-type peptidyl-prolyl cis-trans isomerase |
Protein accession | YP_391365 |
Protein GI | 78485440 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0760] Parvulin-like peptidyl-prolyl isomerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.21744 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTACAAA GCATTAGAAA TCACGCTCAA GGTTGGATAG CCTGGGTTAT TGTTGGATTG ATTATTCTGA CTTTTGCACT TTTTGGAATT GATCAGTACG CCAAAGGTGA CAAAATTATT GTCGTTGCAG AAGTGAATGG AGAAGATGTC ACTGCCAATG AATTTTTAAC GCTTTACAGT CGACAACAAG CCCGTCTTAA AAACCAGTTT GGTGAAATGT ATGATCAGGT GGTAAAAGAC CAGCAGTTGC GCGATGAAGT GATGGATGCT TTGATTGAAT CCGAAGTGGT TCGTCAGTGG GCCGATTCGC ATAACATGAT GATTTCAAAC CAACAGCTTT CAGCCACGAT CGAATCGGCT GAAGTGTTTC AGAAGGACGG TCAGTTTGAC CAGCAACTTT ACCAAGACAT CTTGTTGCAA AATGGGTTGA ATGTGGCTCG TTTTGAATAT GAGCAAAGAC AGTTCTTAAT TGAAAATCAA AATCGTCAAC TGACAATGGC TTCGGCTATC ACAAACGACA CGCAGCTAGC ACAGCTCGCA GCACTTCAGT TTCAACAGCG TAAAGTCAAT TATTTAAGAG TCGATCAGCG CCCGTTCATG CAAGAGGCGC AAATCACAGA CGACGAAATT CAGACGTATT ACAACAAGCA TAAAGAAGAT TTCATAACAC CTGAGCAAGT GGTGTTAAGT TATGTTTTGT TGTCAAAGAA AGACTTGGCA GACAAAGTGA GTGTTGATGA CGCCATTTTG AAACGTTTTT ATCAAGATAA TAAAGATCAA TTTACACAGC CTGAAAAACG TCAAGCGAGC CATATCTTGG TGAAAGTGGA TGCGGAATCG CAAGACGCCG AAGCTCAAAA AACGATTAAA GAGATTCAAG CCAAGTTGGC AGACGGTGAA GACTTTGCGG CATTGGCGAA AACGTATTCA GACGATCCTG GTTCAGCCAA CATGGGCGGT GATTTAGGTC TTTTCCAACA GGGTATGATG GTTCCGGCAT TCGATAAAGC CGTGTTTTCA ATGAAACTGA ATGAAATCAG TGACCCTGTT AAAACAGAGT TTGGTTATCA CTTGATTAAA TTGACCAAAA TTCAACCTAA GAAAATGCAG GCATTCAATG AAGTAAAAGC CGAAGTCGAA ACACTGTATC GTCGTCAGCA GGCGGACAAA CAGTATTTTG ATGAGTTAGA GCAGTTGAAT ACGATCGCCT ATGAACAAGC GGATTCTTTG ATTCCAGCCG CCGATGCGGT TGGCTTGAAA ATAGAAACCA CAGACCCTTT CTCACGAGTG GGTGGTGATG ATGAAATTAC CTCAAATGGC AAAGTCATTA CGGCGGCGTT TTCTGAAGAA GTCAAAAAAT CAGGCCTTAA CAGCAGTGCG ATTGAAATTT CACCTGATGT GTCCGTTGTT GTTCGCGTGA AAAAAGTGAT TGATGAAAAA CAACAATCGT TAGCAGATGT AAAAGTCGAC ATTGAAAAAA TTCTGAAGCG TGAAGCGGGT GTGAAAGCCT CGGCTGAACT TGCGAAAACA CTACGCGAGA AGCTTCTAAA GGGTGAGCAG AAAATGGCTG ACCTGAAAAA AGACGGAGTG GAGTATTCCA ATGTCGGTTG GTTAGAGCGT GAAAACCGTC GTGTTTTACC GCAGCTGACA CAAGCGATCT TTAAGGCACC GAAGCCGAAA GAAGGGCAGC CAACTTATAC GACGTATGCT TTACCAACAG GTGATTCGGT TGTGATTGAA GTATCGGACG TTAAAGAAGG TAACTTGCCG GACGATCAAT CGCAGTTAGC TCAAATGAAA GCGGCTTTGG TTCAGTTGGC AGGGGTTTCT GAAGTTGATG CCCGTATCAA AGCGATGGTT GCTGCAGCGG ACATTGAGCG TAAAGAAAAC TATAAAACGA TTAAGTCAGC AAGATAA
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Protein sequence | MLQSIRNHAQ GWIAWVIVGL IILTFALFGI DQYAKGDKII VVAEVNGEDV TANEFLTLYS RQQARLKNQF GEMYDQVVKD QQLRDEVMDA LIESEVVRQW ADSHNMMISN QQLSATIESA EVFQKDGQFD QQLYQDILLQ NGLNVARFEY EQRQFLIENQ NRQLTMASAI TNDTQLAQLA ALQFQQRKVN YLRVDQRPFM QEAQITDDEI QTYYNKHKED FITPEQVVLS YVLLSKKDLA DKVSVDDAIL KRFYQDNKDQ FTQPEKRQAS HILVKVDAES QDAEAQKTIK EIQAKLADGE DFAALAKTYS DDPGSANMGG DLGLFQQGMM VPAFDKAVFS MKLNEISDPV KTEFGYHLIK LTKIQPKKMQ AFNEVKAEVE TLYRRQQADK QYFDELEQLN TIAYEQADSL IPAADAVGLK IETTDPFSRV GGDDEITSNG KVITAAFSEE VKKSGLNSSA IEISPDVSVV VRVKKVIDEK QQSLADVKVD IEKILKREAG VKASAELAKT LREKLLKGEQ KMADLKKDGV EYSNVGWLER ENRRVLPQLT QAIFKAPKPK EGQPTYTTYA LPTGDSVVIE VSDVKEGNLP DDQSQLAQMK AALVQLAGVS EVDARIKAMV AAADIERKEN YKTIKSAR
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