| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1093 |
|---|
| Symbol | |
|---|
| ID | 3760595 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiomicrospira crunogena XCL-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007520 |
|---|
| Strand | + |
|---|
| Start bp | 1175224 |
|---|
| End bp | 1176393 |
|---|
| Gene Length | 1170 bp |
|---|
| Protein Length | 389 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 637785814 |
|---|
| Product | ATP phosphoribosyltransferase regulatory subunit |
|---|
| Protein accession | YP_391362 |
|---|
| Protein GI | 78485437 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG3705] ATP phosphoribosyltransferase involved in histidine biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAACAAA ATATTTGGTT CACTCCAGAA GGAATTGAAG ACTTATTGCC AGAAGAGGCA
AAAAAGCTTG AGTTCTATCG TCGTCAGTTA CTGGACGGCT TCGAGTTATC AGGTTATGAC
TTGGTACTTC CTCCCATTGC CGAATTTACC GATTCGTTAT TGACGGGCAA AGGCCGACAT
TTGGCGGTTG ATACCTGTCG TTTTACCGAT CAAGAAAGCG GTAAGATGAT GGGGGTTCGT
GCGGACATGA CGCCTCAGGT TGCTCGTATT GCGACGAATC GTATTAAGCA GACAGGCATT
CAACGTTTGT GTTATGTCGG TGAGGTGTTA AAGACGCGCA ATAACAAAGC GAAAGGTTCT
CGTAGCCCGA TTGAGATTGG TGCTGAGTTA TTCGGGCATT CCGGCGTTGA AAGTGACATC
GAAGTCATTG AACTGATGGT GTCGTCTTTA CACAATATTG GTTTGCAAGA TCTAACATTG
AGTTTAGGAC ACGTTTCAGT GGTGGACGAA CTCATGAATG TGTCTGGATT GACACCGACT
CAAAAAGAAA ACCTAGTTGA TATTCTATTG CGTAAAGCGG TGCCAGAATA CACTGACTTT
GTCGCAGAAT TGACCGTAAC GGAAGCTCAA AAACAAGCGT TTGAACTTTT GTTGTCTCTA
TGCGGTGATA TTGCAACGGT TACAGAGGCC ATGCAAGGGC TGGCAGGATT ATCTGAACCC
ATGCAACGTC ATTTAGCACA TCTGCAATCG GTTGTGGATC ACTTTGCAGG TTTTGATGGG
TTGAAAATTC ATATGGATTT AGCCGATTTG CGCGGCTATC AGTATCATAC AGGGATGATT
TTCAGCTGTT ATGCGGCCGG GCGAAAAATG TACCAATTAG CACGTGGCGG ACGTTACGAT
GGGATTGGAT CAGAATTTGG TTCGGCACAG TTAGCAACCG GCTTCAGTTT GGACTTACGC
GGTGCTTTGG ACTTATTGAC CTCACCCGCT GAAGCTGAAA AAGAAATTGT CTATGCACCT
AATGTCTATG ACGCTGACTT ACAAGCGGAA ATTGCAAAAC TGAAACAACA AAAAACGATT
ATAAAACGTT TTTACGAGTT CGATGCCTTA GAGAAAGGCA GTCGTTATTT GGCGCTGCAA
GCATCGCAGT GGATTTTATC TGTTAAATAA
|
|---|
| Protein sequence | MQQNIWFTPE GIEDLLPEEA KKLEFYRRQL LDGFELSGYD LVLPPIAEFT DSLLTGKGRH
LAVDTCRFTD QESGKMMGVR ADMTPQVARI ATNRIKQTGI QRLCYVGEVL KTRNNKAKGS
RSPIEIGAEL FGHSGVESDI EVIELMVSSL HNIGLQDLTL SLGHVSVVDE LMNVSGLTPT
QKENLVDILL RKAVPEYTDF VAELTVTEAQ KQAFELLLSL CGDIATVTEA MQGLAGLSEP
MQRHLAHLQS VVDHFAGFDG LKIHMDLADL RGYQYHTGMI FSCYAAGRKM YQLARGGRYD
GIGSEFGSAQ LATGFSLDLR GALDLLTSPA EAEKEIVYAP NVYDADLQAE IAKLKQQKTI
IKRFYEFDAL EKGSRYLALQ ASQWILSVK
|
|---|
| |