Gene Tcr_1090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1090 
Symbol 
ID3760592 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1172833 
End bp1174050 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content44% 
IMG OID637785811 
ProductHflK protein 
Protein accessionYP_391359 
Protein GI78485434 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0330] Membrane protease subunits, stomatin/prohibitin homologs 
TIGRFAM ID[TIGR01933] HflK protein 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGTGGA ATGAGCCGGG AAAACCTGGA CAAGATCCTT GGGGCAACTC AGGGAACGGT 
AATCGTCCAA ATGATTCAAG AAAACCAAAT GGGCCAAACG ACCCTGACTT ACAAGAGATC
TTAAAGAAAG CACAGGATTT TTTAGGCGGA TCTAATGATA AGTTTGGAGG TGGAAAAGGA
TCGTTTCTGG TTGTTGTTGC TTTAATCATC ATTTGGTTAC TAAGCGGTAT CTACACAGTG
GACTCTCCAG AAAGAGGGGT TGTTAAACGA TTCGGTGCCT ATTCTGAACA AACTACGGCG
GGGTTACACT GGCATATTCC TTGGCCGATT GAAACGGTCA CCATTGTGAA TGTTGATCAG
ATTCGTACCG CTGAAATTGG GTATCGTTCT GACAGTCGTA ACCGAAATGG CAGTGTGCCT
TCCGAAGCCT TGATGCTTTC TAAGGATGAA AACATCGTCG ATATCCGCAT CGCTGTTCAG
TACAAAGTCA GTGACGCACA GAAATATCTG TTTGATGTCG CTGTGCCGGA TATGACGTTG
CGAGATGTGA CTGAAAGTGC GTTAAGAGAA GTTGTTGGGC GTAATACGAT GGACTTCGTC
TTAACCGAGG GGCGTGATGA AGTTGTCAAT AAGGTGAGAA CACTGACGCA AGAAAAGTTG
GATAACTACA ACACTGGTTT GATGATTACC TCGTTGAACT TACAGGATGC GCAGCCACCT
GAGCAAGTTC AAGATGCGTT TGCCGATGTG GTCAAGTCTC GAGAAGATAG AGAAAGACTG
ATTAACGAAG CAGAAGCTTA TTCAAACGAT ATCTTGCCGA AGGCAAGGGG TCAGGCGGCA
CGTCAGATTG AAGAAGCACG AGCTTATCAT GATCAGGTGA TTGCGCGTGC AACAGGTCAA
GCTAACCGTT TCATGAGTAT TCTAAGTGAG TATAAAAAGG CACCAGAAGT AACACGTGAG
CGTCTTTATA TTGATGCCAT CTCAGGCGTT TTGAGCGCAA CATCGAAAGT GTTTGTGGGG
TCAGACAGTG GGTCTAACTT ACTGTATTTA CCATTAGATA AAATGGTAAC AGGCGGAGCC
GGTAATTCTG TTCCTTACAG AATTCCTGCG GATGCAGCTC AGTCGTCTTC AAATACAACG
AATAACAATA ATACACAGTC AAATACCCAG CAAAAAGGGA ATATTCGTGA TTATTTAAGA
ACAAGGGAGC TACGTTAA
 
Protein sequence
MAWNEPGKPG QDPWGNSGNG NRPNDSRKPN GPNDPDLQEI LKKAQDFLGG SNDKFGGGKG 
SFLVVVALII IWLLSGIYTV DSPERGVVKR FGAYSEQTTA GLHWHIPWPI ETVTIVNVDQ
IRTAEIGYRS DSRNRNGSVP SEALMLSKDE NIVDIRIAVQ YKVSDAQKYL FDVAVPDMTL
RDVTESALRE VVGRNTMDFV LTEGRDEVVN KVRTLTQEKL DNYNTGLMIT SLNLQDAQPP
EQVQDAFADV VKSREDRERL INEAEAYSND ILPKARGQAA RQIEEARAYH DQVIARATGQ
ANRFMSILSE YKKAPEVTRE RLYIDAISGV LSATSKVFVG SDSGSNLLYL PLDKMVTGGA
GNSVPYRIPA DAAQSSSNTT NNNNTQSNTQ QKGNIRDYLR TRELR