Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_1090 |
Symbol | |
ID | 3760592 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | + |
Start bp | 1172833 |
End bp | 1174050 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637785811 |
Product | HflK protein |
Protein accession | YP_391359 |
Protein GI | 78485434 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
TIGRFAM ID | [TIGR01933] HflK protein |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGTGGA ATGAGCCGGG AAAACCTGGA CAAGATCCTT GGGGCAACTC AGGGAACGGT AATCGTCCAA ATGATTCAAG AAAACCAAAT GGGCCAAACG ACCCTGACTT ACAAGAGATC TTAAAGAAAG CACAGGATTT TTTAGGCGGA TCTAATGATA AGTTTGGAGG TGGAAAAGGA TCGTTTCTGG TTGTTGTTGC TTTAATCATC ATTTGGTTAC TAAGCGGTAT CTACACAGTG GACTCTCCAG AAAGAGGGGT TGTTAAACGA TTCGGTGCCT ATTCTGAACA AACTACGGCG GGGTTACACT GGCATATTCC TTGGCCGATT GAAACGGTCA CCATTGTGAA TGTTGATCAG ATTCGTACCG CTGAAATTGG GTATCGTTCT GACAGTCGTA ACCGAAATGG CAGTGTGCCT TCCGAAGCCT TGATGCTTTC TAAGGATGAA AACATCGTCG ATATCCGCAT CGCTGTTCAG TACAAAGTCA GTGACGCACA GAAATATCTG TTTGATGTCG CTGTGCCGGA TATGACGTTG CGAGATGTGA CTGAAAGTGC GTTAAGAGAA GTTGTTGGGC GTAATACGAT GGACTTCGTC TTAACCGAGG GGCGTGATGA AGTTGTCAAT AAGGTGAGAA CACTGACGCA AGAAAAGTTG GATAACTACA ACACTGGTTT GATGATTACC TCGTTGAACT TACAGGATGC GCAGCCACCT GAGCAAGTTC AAGATGCGTT TGCCGATGTG GTCAAGTCTC GAGAAGATAG AGAAAGACTG ATTAACGAAG CAGAAGCTTA TTCAAACGAT ATCTTGCCGA AGGCAAGGGG TCAGGCGGCA CGTCAGATTG AAGAAGCACG AGCTTATCAT GATCAGGTGA TTGCGCGTGC AACAGGTCAA GCTAACCGTT TCATGAGTAT TCTAAGTGAG TATAAAAAGG CACCAGAAGT AACACGTGAG CGTCTTTATA TTGATGCCAT CTCAGGCGTT TTGAGCGCAA CATCGAAAGT GTTTGTGGGG TCAGACAGTG GGTCTAACTT ACTGTATTTA CCATTAGATA AAATGGTAAC AGGCGGAGCC GGTAATTCTG TTCCTTACAG AATTCCTGCG GATGCAGCTC AGTCGTCTTC AAATACAACG AATAACAATA ATACACAGTC AAATACCCAG CAAAAAGGGA ATATTCGTGA TTATTTAAGA ACAAGGGAGC TACGTTAA
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Protein sequence | MAWNEPGKPG QDPWGNSGNG NRPNDSRKPN GPNDPDLQEI LKKAQDFLGG SNDKFGGGKG SFLVVVALII IWLLSGIYTV DSPERGVVKR FGAYSEQTTA GLHWHIPWPI ETVTIVNVDQ IRTAEIGYRS DSRNRNGSVP SEALMLSKDE NIVDIRIAVQ YKVSDAQKYL FDVAVPDMTL RDVTESALRE VVGRNTMDFV LTEGRDEVVN KVRTLTQEKL DNYNTGLMIT SLNLQDAQPP EQVQDAFADV VKSREDRERL INEAEAYSND ILPKARGQAA RQIEEARAYH DQVIARATGQ ANRFMSILSE YKKAPEVTRE RLYIDAISGV LSATSKVFVG SDSGSNLLYL PLDKMVTGGA GNSVPYRIPA DAAQSSSNTT NNNNTQSNTQ QKGNIRDYLR TRELR
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