Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_1085 |
Symbol | |
ID | 3760587 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | + |
Start bp | 1166669 |
End bp | 1167643 |
Gene Length | 975 bp |
Protein Length | 324 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637785806 |
Product | tRNA delta(2)-isopentenylpyrophosphate transferase |
Protein accession | YP_391354 |
Protein GI | 78485429 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0324] tRNA delta(2)-isopentenylpyrophosphate transferase |
TIGRFAM ID | [TIGR00174] tRNA isopentenyltransferase (miaA) |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.912595 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAATCGA TGAATGTGGC GCAGCTCATT GAACAAAAAA TCTGTCTGGC GATCATGGGG CCAACGGCTT CTGGGAAAAG TGGATTGACC ATGGCGTTGG CCAAGCACCT TCCGATTGAA ATCATCAGCG TGGATTCGGC CTTGATTTAT CGTGGAATGG ATATTGGAAC CGCCAAACCA ACACTGGATG AACAGGTTGC TGTACCACAT CATTTAATCG ATATTCTGGA TCCGACAGAA AGTTATTCGG CTGCGGATTT TGTGGAAGAT GTCCATGAAC TGGTGAAAGA GATTTTTGCA AGAGGCAACT TACCGGTGCT GGCGGGTGGA ACCATGATGT ACTTTAATGC GTTGCAACAG GGCATGGCGA AGCTGCCTTC GGCGGATGAA GCAATACGTG CCAAAATTCA CCAGGCCTGG CAAGCGAACC CGGCGGCGGT TCATGCACAA CTGAAACAAG TGGATCCAGA GGCTGCTGAA CGCATTCATC AAAATGACCC TCAACGCTTA ATTCGCGCTT TAGAAGTCTA TGAAATGACG GGCAAACCGC TGACACAGTT GCAGCGAGAA GGTCAGCAAG AAGGGTTGAC TGAATTTAAA CTGGCGAAAG TGGCTTTGAT TCCTGAAGAC CGTAAAAAAC TGCATGAACA AATTGCGGTG CGGTTTCATG AAATGCTGAA TAACGGGTTT TTAAAAGAAG CGGAAAAGGT GTTTTCTTTA GACGGTTTAA GCGCCGATTT ACCTGCCATT CGCAGCGTCG GTTATCGCCA GGCCTGGCTG TTTTTTGCAC AAGAATATGA TTACGACACC TTTGTCGAAA AAAGCATTGT GGCCACTCGC CAGTTAGCCA AACGTCAGAT TACCTGGCTT AGAAAAGAAC AGGATTTACT GGTGCTGGAT CCCTTTAAAA CAAATGTTGA CGATAGGGTT GAAGCTGTTT TAGATTACTT GTCTGCGTTA ACGAAAAATG CTTAA
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Protein sequence | MQSMNVAQLI EQKICLAIMG PTASGKSGLT MALAKHLPIE IISVDSALIY RGMDIGTAKP TLDEQVAVPH HLIDILDPTE SYSAADFVED VHELVKEIFA RGNLPVLAGG TMMYFNALQQ GMAKLPSADE AIRAKIHQAW QANPAAVHAQ LKQVDPEAAE RIHQNDPQRL IRALEVYEMT GKPLTQLQRE GQQEGLTEFK LAKVALIPED RKKLHEQIAV RFHEMLNNGF LKEAEKVFSL DGLSADLPAI RSVGYRQAWL FFAQEYDYDT FVEKSIVATR QLAKRQITWL RKEQDLLVLD PFKTNVDDRV EAVLDYLSAL TKNA
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