| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1083 |
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| Symbol | |
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| ID | 3760585 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | + |
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| Start bp | 1163058 |
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| End bp | 1164578 |
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| Gene Length | 1521 bp |
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| Protein Length | 506 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637785804 |
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| Product | N-acetylmuramoyl-L-alanine amidase |
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| Protein accession | YP_391352 |
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| Protein GI | 78485427 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0860] N-acetylmuramoyl-L-alanine amidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.91418 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCAGAA AAAATAACGT AAATTACTTT AAAGCGTTCA TGTCAGCAAT GGCTGTGATG
TTAGTGGTGG TAATGTCGTC TTCCGTATTT GCCAAAACGA CTCTGGTAAA GATGCGAATG
GGGCAGGGCG AAGATAAAAC GCGCGTGGTG TTTGAAATCA AACAAAACCA TCGTTTTGAA
ATTACTACGT TAAAAAATCC GGCTCGTATT GTAGTGGATT TCTATAAAGC GGATAACCAG
TTAACGTTTT CAAAAATGAA ATTTCTCGAT GCACGTGTCA AGCAAGCACG TGTCAAAAAT
CAAGCTAAGC GTACCCGTGT TGTTTTAGAT TTGCGTGACG ATTTTGATTA CAACTACTTT
ACGTTGGCTA AGAACAAAAG CGGTGCAGAG CGTGTTGTGA TTGATGTTTC GAACCGTAAA
GCAGCCAAAC AAGTTGCTAA AACACTGGTT AAAAAAGCAA CAAAACCCGT TAAACAAACC
GTCGTTGCTA AAAAAACAGC GCCTAAAAAA GTAACTCGCC AAGTCGCTCA AGCGTCTTTT
AGTGCCAAGC CTAAAACCAA TAAACCCTCT CATAAAGAAG ATGTTGCCGA TAACCATACG
ACGCGTTCTA TGTTGAACAG CGGCAGTGAT GTGTTTCAAC CGAAAAATAA AGACTTAGTC
GTTGCGATTG ATGCCGGACA TGGTGGAAAA GACACGGGCG CGATCGGGCA TAACAACCTA
CGTGAAAAAG TTGTTGTGTT GAAGTTGGCA AAAAAATTGA AAAAATATAT TGATGCGCAA
CCAGGGATGC GTGCTGTTTT GACGAGAGAT AAAGATGTCT TTATCCCGTT GCACAAACGT
GTGCGTATCG CGCACAAAAA AGATGCGGAT ATTTTCTTGT CATTGCATGC CGATGCCTTC
CCGGATGCAC GTGCTCGTGG CGGATCGGTT TACATTCTGT CAACGAATGG TGCCAGTAGT
GTGATGGCGC GTATTTTGGC TAAATCTGAA AATGCATCCC TTCAAGATGT GAAGTTAAAA
GGGCGTGATG CCGATGTGGC CTTTGTTTTA TCCGATTTAA CGCGTTCGGC TAACATTCGT
GCCAGCCGTA AGCTAGGTCA GGCAGTACTG GGGGAAATGG CGCGTTCGGT TCGATTGCAT
AAAAAATCGG TTCAGTCGGC GGATTTTGCG GTATTGAAGT CAATTGATAT GCCGTCTCTT
TTAATCGAAA CAGCGTTTAT TTCCAACCCG GAAGAAGCTA GAAAATTAAG CTCTGATCAC
TTTCAAACAC AAATGGCGAA GTCTATTGTG AGTGGGTTAG ATAAGTTCGT TCAGCATAAT
GCAACCAAAC CTCGTTGGGG AGAACAGTTG TATGTTCACT ACCGTGTTCA AAGTGGCGAT
ACCTTGTCGG AAATTGCAGA AAACTACAAT ATCTCAACGT ATAAGTTGAA AAAAATTAAC
GGAATTAAAA AAGCAGATCG TTTATACGTT GGTAAAAAGT TACGTATTCC TGTCTCTGAG
GATGTCATCG CAACGTTATA A
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| Protein sequence | MIRKNNVNYF KAFMSAMAVM LVVVMSSSVF AKTTLVKMRM GQGEDKTRVV FEIKQNHRFE
ITTLKNPARI VVDFYKADNQ LTFSKMKFLD ARVKQARVKN QAKRTRVVLD LRDDFDYNYF
TLAKNKSGAE RVVIDVSNRK AAKQVAKTLV KKATKPVKQT VVAKKTAPKK VTRQVAQASF
SAKPKTNKPS HKEDVADNHT TRSMLNSGSD VFQPKNKDLV VAIDAGHGGK DTGAIGHNNL
REKVVVLKLA KKLKKYIDAQ PGMRAVLTRD KDVFIPLHKR VRIAHKKDAD IFLSLHADAF
PDARARGGSV YILSTNGASS VMARILAKSE NASLQDVKLK GRDADVAFVL SDLTRSANIR
ASRKLGQAVL GEMARSVRLH KKSVQSADFA VLKSIDMPSL LIETAFISNP EEARKLSSDH
FQTQMAKSIV SGLDKFVQHN ATKPRWGEQL YVHYRVQSGD TLSEIAENYN ISTYKLKKIN
GIKKADRLYV GKKLRIPVSE DVIATL
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