| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1081 |
|---|
| Symbol | |
|---|
| ID | 3760583 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiomicrospira crunogena XCL-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007520 |
|---|
| Strand | - |
|---|
| Start bp | 1161185 |
|---|
| End bp | 1162399 |
|---|
| Gene Length | 1215 bp |
|---|
| Protein Length | 404 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637785802 |
|---|
| Product | 4Fe-4S cluster binding |
|---|
| Protein accession | YP_391350 |
|---|
| Protein GI | 78485425 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1600] Uncharacterized Fe-S protein |
|---|
| TIGRFAM ID | [TIGR00276] iron-sulfur cluster binding protein, putative |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAAAT CCACCCCAAC AACAATCAAA AAACCAACTG ATTCAGAATT ATACCAGCTT
GCGGACAAGA TTAAACAATG GGGTATTTCG CTTGGCTTTG CGGATGTCGG CATTACCGAC
ATTGATTTAA GCCAATATGA ATCCAGTTAT TTTGAATGGC TTGAAAAACG CTTTCATGCC
GACATGGACT ATATGGTTAA ACATGGCACC AAACGAACGC GCCCTGAAGA GTTGGAACCT
GGCACTCGTC GCGTCATCAG TGTTCGGATG AATTACTTTG ATACAAAAGC TTATTCTCCC
ATCACCCAAC TGCAAGCCAG TGACCACGCC TACATTTCAC GTTATGCTTT ACACAAAGAC
TATCACAAAC TGATGCGTAA ACGTTTACAG CAACTGGCTG AAAAAATTAA TCAGGCGGTT
GAAAACGACT TTCATTACCG CGCTTTCTGT GATTCCGCGC CGGTATTGGA ACGCCCTTTA
GCGGAAAAAG CCGGGCTTGG GTTCATTGGC AAAAATAGCT TAATCATTCA TCCTCGTGCC
GGCTCTTGGT TTTTCTTAGG GGAACTGTAT ACCAATTTGC CGTTACCCAT TGACCCTCCT
TTTGAAAAAC ATGGCTGTGG TCCATGCACG GCGTGCATTC AAGAATGCCC GACTCAGGCC
ATTGTCGCCG ACGGTGTGGT TGACTCCCGT CGTTGCATCT CGTATCTAAC CATTGAAAAC
AAAGGGATCA TACCCGAATC GCTGCGAGAA AAAATGGGCA ACCGAATCTA TGGCTGTGAT
GACTGTCAAC TGGTTTGCCC TTGGAATAAA TTTACTCAGG ACACGAATGA AACCGCATTC
AAAGCCAATT CTCTACTGGA TGCCAGCAGC TTGCTTGAAC TGTTTAATTG GCCTGAAAAA
CAATTCCTCA ATCAACTTGA AGGCTCTCCT ATCCGTCGTA TAGGGTTTGA ACAATGGCAA
CGCAATCTTT GCGTTGCCTT AGGCAACGCG CTGGAAACCC CAGAACTGAG TCAAAAGATC
ATCCATGCCT TAGAAAACCA TCAAAGTGAT TCTGACTTGG TTAATGAACA TAAACGCTGG
GCATTACAGC GCCAGCAACA CTTTATGAAG GCGCCAGAAG AAATGGCCAG GCCTGGCCAT
TTTTCATCGC CTTCAAAACC ACACAAAGCC AAAAAATATT ATTTACCGAA AACCATTGCC
ATCCGTAAAC AATAA
|
|---|
| Protein sequence | MQKSTPTTIK KPTDSELYQL ADKIKQWGIS LGFADVGITD IDLSQYESSY FEWLEKRFHA
DMDYMVKHGT KRTRPEELEP GTRRVISVRM NYFDTKAYSP ITQLQASDHA YISRYALHKD
YHKLMRKRLQ QLAEKINQAV ENDFHYRAFC DSAPVLERPL AEKAGLGFIG KNSLIIHPRA
GSWFFLGELY TNLPLPIDPP FEKHGCGPCT ACIQECPTQA IVADGVVDSR RCISYLTIEN
KGIIPESLRE KMGNRIYGCD DCQLVCPWNK FTQDTNETAF KANSLLDASS LLELFNWPEK
QFLNQLEGSP IRRIGFEQWQ RNLCVALGNA LETPELSQKI IHALENHQSD SDLVNEHKRW
ALQRQQHFMK APEEMARPGH FSSPSKPHKA KKYYLPKTIA IRKQ
|
|---|
| |