Gene Tcr_1077 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1077 
Symbol 
ID3761825 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand- 
Start bp1155613 
End bp1156296 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content43% 
IMG OID637785798 
Producthypothetical protein 
Protein accessionYP_391346 
Protein GI78485421 
COG category[S] Function unknown 
COG ID[COG3619] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCTACC CGAAGACAGC TTCCGACTAT TCCAAACCCA AAGTATTTGT CATTGCGTTC 
ATAATGGCCG CTATTGCAGG TTACATCAAC AGCATCATGC TGGTTGAATT TGGGATGCCG 
GTCAGTCAAA TGACAGGCAT AGCTTCCCAC CTCAGTGAAA GTGGCTTTTA TTTTGAATGG 
GACACCTTGA TTATCAGCCT TCTGATTCTC ATCAGCTTTA TTGGTGGCGC CTTCTTATCA 
GGGCTGATTA TCAATCACGG TCAATACCAA GAAGACAAAA GCTATGGTGT GGCGCTTTTA 
ATTAACAGCA TCACCTTACT TCTATCCACG TTATTCGCAT TTTATTTTAC AACACTGGCG 
CTCATATTCA GTGCCATCGC CTGTGGCTTA CAAAACGCCA TGGTAGCCAG TTACAAAGGC 
TTGCAGGTTC GAACCACTCA TGTCACAGGA ATCTCAACCG ATATCGGCGT CCATCTAGCA 
CATCGTTTTA AAAACAACAC CCCTTTTAGC TGGCGAGTTT GGCTCTTGTT TTGCATTTTG 
GCAGGCTTTA TTCTTGGCGG TTTACTGGGT ATTTTATGTT TTCAAGTTTT CGGTTACCTT 
GCTATAACGA TTCCTGCCAT GTTAAATGGA TTGCTTGCTG TTCTTTATTT TCACTCTATC 
GGTGTCGCTT CACGTGCTGA ATAA
 
Protein sequence
MPYPKTASDY SKPKVFVIAF IMAAIAGYIN SIMLVEFGMP VSQMTGIASH LSESGFYFEW 
DTLIISLLIL ISFIGGAFLS GLIINHGQYQ EDKSYGVALL INSITLLLST LFAFYFTTLA 
LIFSAIACGL QNAMVASYKG LQVRTTHVTG ISTDIGVHLA HRFKNNTPFS WRVWLLFCIL 
AGFILGGLLG ILCFQVFGYL AITIPAMLNG LLAVLYFHSI GVASRAE