Gene Tcr_1067 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1067 
Symbol 
ID3761815 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1144283 
End bp1145545 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content45% 
IMG OID637785788 
Producthypothetical protein 
Protein accessionYP_391336 
Protein GI78485411 
COG category[S] Function unknown 
COG ID[COG3174] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTACAT CTTTATACGT TTTTTATAGT TTAGCCGTTG CTCTTGCTAT TGGACTGTTG 
ATAGGCATTG AGCGTGGCTG GAAAAAACGT GAGTCTATTG AGGGGTCTCG CATTGCAGGT
GTGCGAACTT TTGGATTGAT CGGATTGCTT GGCGGTGCCA GCGCGTTGCT ATCACAAACC
TTTGGTGCTT TGGTGTTAGG CGCTGTTTTT ATAGGGTTAG CCGTGATTTT AGCATCAGCG
TATCTTGCCG CATTGAAAAA TAATCAGGAT GTAGGCATCA CGACCCTTGT CGCAGCGTTA
TTGACTTTTA TACTTGGTGC CTTAGCGGTA ATGGATCAAG TGATACTGGC ATCAACGTCA
GCGGTTGTGA TGACGTTGCT TTTAGGCTAT AAGCCGATAT TGCATCAATG GATAGGGGCA
CTTGAAAGAA AAGAGCTGCG GGCAGGCATC AAGCTATTGT TATTGTCGGT TGTGTTATTG
CCTATTTTAC CCAATCAGGG TTATGGTCCT TGGCAAGCGC TGAATCCTTA TGTCATCGGT
TGGATGATTG TATTGATCGC GCTGATTTCT TTTGTCGGGT ATTTTGCTAT CAAAATTGGG
GGCGCCAAAA GAGGGGTAGT GTTTACTGGG TTATTTGGTG GGTTGTCAGC CTCTACTGCA
GTGACACTTC GATTTTCACA ACTGGCGCGT AAAGATATTC ATATGAGTGC CATGTTATCA
GTGGGCGTGT TGTTAGCCTG TGGAACCATG CTGCCTCGAA TGCTGTTGGT GGCGGGTGTG
TTCAATTTAA ATTTGGTTGC CTTGTTGTGG TTACCCGTAA TGGTCATGGC GCTGTTGATT
TATTTGCCGG CGATGTTCTA TTGGCGAACC CAAACTGAAA AAAACATTGA TACTTCTTCG
GTTTTAACCA ACCCTCTGGA TTTGAAAGTG GCACTGGCCT TTGGCGGTTT GTTGGTATTG
GTCATGTTAC TGAGCGCCTT TTTAAAGCAG GCCTATGGTG ATGCCGGTAT ATTAGCTTTG
GCCGGTGCCT CCGGTATTTT TGATGTCGAT GCCATTACCT TATCGTTAGC ACGGATGAGC
CAAGATAATT TGGCTGTAAA CATCACTGTA ACAGGGCTGA TTATTGCGGC AGCAAGTAAC
AATCTGGTTA AGGCGATGAT GGCCAGCTTT ATTGGTGGGA AAGAAATGAC GTTAAAAGTC
GGGTTGCCTT TAGTTATCAG TAGTTTTGGA GGAGGATTAT CTGTTTGGCT GTGGGTCTGG
TAA
 
Protein sequence
MSTSLYVFYS LAVALAIGLL IGIERGWKKR ESIEGSRIAG VRTFGLIGLL GGASALLSQT 
FGALVLGAVF IGLAVILASA YLAALKNNQD VGITTLVAAL LTFILGALAV MDQVILASTS
AVVMTLLLGY KPILHQWIGA LERKELRAGI KLLLLSVVLL PILPNQGYGP WQALNPYVIG
WMIVLIALIS FVGYFAIKIG GAKRGVVFTG LFGGLSASTA VTLRFSQLAR KDIHMSAMLS
VGVLLACGTM LPRMLLVAGV FNLNLVALLW LPVMVMALLI YLPAMFYWRT QTEKNIDTSS
VLTNPLDLKV ALAFGGLLVL VMLLSAFLKQ AYGDAGILAL AGASGIFDVD AITLSLARMS
QDNLAVNITV TGLIIAAASN NLVKAMMASF IGGKEMTLKV GLPLVISSFG GGLSVWLWVW