Gene Tcr_1047 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1047 
Symbol 
ID3760569 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1124369 
End bp1125418 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content40% 
IMG OID637785768 
Producthypothetical protein 
Protein accessionYP_391316 
Protein GI78485391 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAAGTT TTGTCTCAAT TGTATTTTTT ATGCTGATAA CGCATACGGT TTATGGTTAT 
GCCAATCCAA AGACTGATTT ATTTGATGTT CGTATTTTGC AAAATGAAGC CGCGGACAGT
AAAAAGAGCC TGGATGATAG TTTATTAGAC GCCATTAAAA TTGAATTGGT TCGCTTAACA
GGTAATCCCG AATTCATTCT TCAGAATGAG GCAAAAACTT TTATTCAAAA CCCTAAGGCT
TGGTTGAAAA GTTATCGGTA TGAACCGTAT GAGCAAGATG GGGTTAGAGT TGGCACTTTT
TTAGTATTTG AATTTGATCA AGAACGGTTT TATGACTACT TCCAAAAACA AGGGTTTGTG
ATTTGGCCTT ATGCAAATCG TCCTGTGACC TATGTAATGG GATCGCAATT GATTGCCGGT
ACTTTGGTCA AACTCAATCG TCAAAATCTC AGTTATTTAC CTAAAATGGA TTTTAGAAAT
AAAGCCAATC AATTAGGGTT GCCTTATGAG ATTCCTTCAA ATGAAGGGCA ATGGATTTAT
CCAGATTCAA CCGATGGGTT TAACCCGCGT ATTCCGGATT TGTTGCAAGG TACGGAGGCT
TCGTACTTGC TAAGTTTCCA AGTGGTTTCG GATATAGATG GTTCGGAGCG TTTCAAATGG
CAGTTATTTA ATCGAAATGG TCAGAGTCTT TTGCAGGCAG AAGCGTCAGG CAGTTCCTCG
AGTGTTTATT TCGAAGCAAC GTTACAGCAG TTGATGCAGA TGTATTCAGC GCCTTATCGC
GAACAAGCCG AGTTTTTGGG ATCGTTGACC TTAGTGGTGA AAGATGTGAC GTCTGTTGAG
CGGCTGACAA AAGCGGAAGA GGCCTTGATT GATTTAAAAC CAATTGTGCA TCAGGCACGT
TTATCAGCCG TTTCTGAAAA AAAAGCCACT TTTGAGATTG TGTATCAAGG CGACTACAAT
CGCCTTTTAG AGCATTTGCA AAAAATTGAT GACTTGCAGT TGATCCAGGA TGACGCAGTG
ATTGGGCAAG TCATTGCCAA GTGGTTATAA
 
Protein sequence
MRSFVSIVFF MLITHTVYGY ANPKTDLFDV RILQNEAADS KKSLDDSLLD AIKIELVRLT 
GNPEFILQNE AKTFIQNPKA WLKSYRYEPY EQDGVRVGTF LVFEFDQERF YDYFQKQGFV
IWPYANRPVT YVMGSQLIAG TLVKLNRQNL SYLPKMDFRN KANQLGLPYE IPSNEGQWIY
PDSTDGFNPR IPDLLQGTEA SYLLSFQVVS DIDGSERFKW QLFNRNGQSL LQAEASGSSS
SVYFEATLQQ LMQMYSAPYR EQAEFLGSLT LVVKDVTSVE RLTKAEEALI DLKPIVHQAR
LSAVSEKKAT FEIVYQGDYN RLLEHLQKID DLQLIQDDAV IGQVIAKWL