Gene Tcr_1046 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1046 
Symbol 
ID3760568 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1123101 
End bp1124144 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content45% 
IMG OID637785767 
Productphosphoribosylformylglycinamidine cyclo-ligase 
Protein accessionYP_391315 
Protein GI78485390 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0150] Phosphoribosylaminoimidazole (AIR) synthetase 
TIGRFAM ID[TIGR00878] phosphoribosylaminoimidazole synthetase 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGAAAA ATAACCAATC TATAAGTTAC AAAGACGCCG GCGTTGATAT TGATGCTGGT 
AACGCCCTTG TTGAAGCCAT CAAACCTATC GCAAAAGCAA CAGCCAGACC AGAAGTCTCA
ACCTCCTTAG GAGGGTTTGG TGCGCTTTTC GAACTTCCTA TGGATAAATA TAAAAACCCA
CTACTGGTTT CAGGAACAGA TGGTGTTGGC ACCAAACTTC GTCTAGCCAT TGAAAGCGGT
AAGCATGACC AGGTTGGAAT CGATTTAGTG GCCATGTGCG TCAACGATTT AATCGTGCAA
GGTGCTGAAC CTCTTTTCTT TCTAGATTAT TACGCAACCG GTAAGCTGGA TATTTACACG
GCAAGAGATG TCGTCGCTGG TATTGGTGAA GGATGTCAGC AATCGGGTTG CGCATTGATT
GGTGGGGAAA CAGCTGAAAT GCCAGGCATG TATCCTGACG GTGACTATGA CCTTGCAGGT
TTCTGTGTTG GTATTGTTGA AAAAGCCGAT TTGATCGATG GTACAAAAGT GAAAGCGGGA
GACGTACTAT TAGGTCTAGC CTCTTCAGGC CCACATTCCA ATGGCTATTC TTTAATTCGA
AAAATCATTG AAGTAAACGG TGCCAATCTT AATGAAGAGT GTGATGGTCA GCCTTTAATT
GATGCTTTAA TGGCTCCGAC ACGCATTTAT GTCAAGTCCA TCTTAGCGTT AATGAAGCAG
ATCGAAATTC ATGCCATCTC GCACATTACG GGGGGTGGCC TACTCGAAAA TCTACCACGC
GTTATGCCTA ATAACACCAA AGCGAAAGTT GATACGAAAA GCTGGAATCG CCCAGCGGTA
TTTGACTGGA TTCAAACACA TGGAAATGTT GAGTTCCATG AAATGCACCG CACCTTAAAC
TGCGGTATCG GAATGGTTGT CGTGGTGGAT GAAAAAGACC AGCAAGCGGC CATTGATGCT
TTAACTGCGC AAGGTGAAGT GGTTTCAGTC ATCGGAAAAA TCGAAAGCAG CGAATCAGAA
ACGCCAGAAG TCGATTTAGT TTAA
 
Protein sequence
MTKNNQSISY KDAGVDIDAG NALVEAIKPI AKATARPEVS TSLGGFGALF ELPMDKYKNP 
LLVSGTDGVG TKLRLAIESG KHDQVGIDLV AMCVNDLIVQ GAEPLFFLDY YATGKLDIYT
ARDVVAGIGE GCQQSGCALI GGETAEMPGM YPDGDYDLAG FCVGIVEKAD LIDGTKVKAG
DVLLGLASSG PHSNGYSLIR KIIEVNGANL NEECDGQPLI DALMAPTRIY VKSILALMKQ
IEIHAISHIT GGGLLENLPR VMPNNTKAKV DTKSWNRPAV FDWIQTHGNV EFHEMHRTLN
CGIGMVVVVD EKDQQAAIDA LTAQGEVVSV IGKIESSESE TPEVDLV