Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_1033 |
Symbol | |
ID | 3760743 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | - |
Start bp | 1108089 |
End bp | 1109120 |
Gene Length | 1032 bp |
Protein Length | 343 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637785754 |
Product | electron transport complex, RnfABCDGE type, D subunit |
Protein accession | YP_391302 |
Protein GI | 78485377 |
COG category | [C] Energy production and conversion |
COG ID | [COG4658] Predicted NADH:ubiquinone oxidoreductase, subunit RnfD |
TIGRFAM ID | [TIGR01946] electron transport complex, RnfABCDGE type, D subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.000831458 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAACCA TTCCGCATAC CTCTCCATTT ACCCATAACG CCAGCAGCGT TAGAAAAGTA ATGCTACAAG TGCAAATTGC TGCTTTTCCG GCATTGATGA CGCACATCTA TTTTTTCGGA TTCGGCATTA CCATTCAATG GACGTTAGCG GTACTTACCC TAATCATAGT GGAAACCACG TTATTAAAAT TACGTGACCG CCCTGTCGCA CCCTACTTAT TTGATTTAAG TGGTCTGATT ACGGTTACAG GGATCGTATT CTGTATTCCA CCGGAAGCGC CTTGGTGGGT AATTGTCTCA GGGGTGACGT TTGCACTCAT TTTCGGAAAA CACCTTTATG GTGGTTTAGG CTATAACCCT TTTAACCCGG CCATGCTAGG CTATGCCTTC TTATTGATTT CCTTTCCCGC CGAATTAACC CAGTGGACAC TGCCATCCGA AGTGTCCGGT CATCACATCA GTTTCATTGA ATCGTTCCAT TTAATTTTTA CCGGACAATC ATTGAACTTA TCTTTTGACC AACTCACGGG CGCCACGCCA CTTGATGAAG TAAAAACGGC GTTATCCATG GGAGTGCCTG TGACCACCAC GCTCAACAGT TCTAACTTTA ATGGCGAACA AATCCCTTAT GGTTGGGCAT GGATTAATAT GGCTTTTTTC CTCGGTGGGT TATGGATGTT GTATAAACGC GCTATCCGCT GGCAGTATCC GGTCGGTTTC TTAGGCACCT TAGCGGCCAT TGCCTATCTC TTTAACTGGA TCGATCCGAA CACTTATGCC CCAGCCAGCT TTCATTTATT AACGGGCGGC ATCATGTTAG CGGCGTTCTT TATCATTACC GACCCTGTGA CTTCTAGCAC CACGCCGCTT GGCCGATTTG TTTACGCCGC CGGCATTGCC GTGCTGGTGT ATGTCATCCG AAACTGGGGA GCTTTCCCGG ATGGCATTGC ATTTGGGATC TTAATTATGA ACATGTTTGT TCCTTTAATT GACCAATACA CTCAACCGCG TGTCGTCGGG TATCGGAGAT AA
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Protein sequence | MATIPHTSPF THNASSVRKV MLQVQIAAFP ALMTHIYFFG FGITIQWTLA VLTLIIVETT LLKLRDRPVA PYLFDLSGLI TVTGIVFCIP PEAPWWVIVS GVTFALIFGK HLYGGLGYNP FNPAMLGYAF LLISFPAELT QWTLPSEVSG HHISFIESFH LIFTGQSLNL SFDQLTGATP LDEVKTALSM GVPVTTTLNS SNFNGEQIPY GWAWINMAFF LGGLWMLYKR AIRWQYPVGF LGTLAAIAYL FNWIDPNTYA PASFHLLTGG IMLAAFFIIT DPVTSSTTPL GRFVYAAGIA VLVYVIRNWG AFPDGIAFGI LIMNMFVPLI DQYTQPRVVG YRR
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