Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_1030 |
Symbol | |
ID | 3760740 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | - |
Start bp | 1106063 |
End bp | 1106695 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637785751 |
Product | endonuclease III |
Protein accession | YP_391299 |
Protein GI | 78485374 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0177] Predicted EndoIII-related endonuclease |
TIGRFAM ID | [TIGR01083] endonuclease III |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.000000273588 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAAAC AAAAACGCTT AGAAATTTTT CAACGCTTAT CAGAAGCCAT TCCAGAACCG GAAACAGAAC TGAATTACAG CACGCCTTTC GAGCTGCTTA TTGCTGTGAT CTTATCGGCA CAGGCCACAG ATAAAGGTGT CAATATTGCC ACCGACAAAT TGTTTCCGGT CGCCAATACA CCGGAAGCCA TCTATGCGTT AGGCGAAGAA GGACTGAAAG AATACATTAA AACCATTGGG CTGTTTAATA CCAAAGGCGC CAACATTATC AAAACCTGCA AAATGCTGAT TGATTTGCAC AACTCTCAGG TGCCCGATAA TCGAAAAGAC CTAGAAGCTT TACCAGGTGT TGGTCGTAAA ACCGCCAATG TCGTTTTGAA CACCGCCTTT GGTCACCCCA CTATGGCAGT CGACACTCAT ATTTTTCGGG TATCGAACCG CACCAAGCTC GCGCCGGGCA AAAATGTCTT AGAAGTCGAA CAAAAGCTTT TGAAAAACGT ACCGAAAGAA TACATTATTC CAGCCCATCA CTTACTGATT CTCCATGGAC GCTACACTTG TACCGCTCGT AAACCTAGAT GTGGTGCTTG TTGCATTTAC GATTTATGTG AATACAAAGA GAAGACGGCT TAA
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Protein sequence | MNKQKRLEIF QRLSEAIPEP ETELNYSTPF ELLIAVILSA QATDKGVNIA TDKLFPVANT PEAIYALGEE GLKEYIKTIG LFNTKGANII KTCKMLIDLH NSQVPDNRKD LEALPGVGRK TANVVLNTAF GHPTMAVDTH IFRVSNRTKL APGKNVLEVE QKLLKNVPKE YIIPAHHLLI LHGRYTCTAR KPRCGACCIY DLCEYKEKTA
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