Gene Tcr_1024 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1024 
Symbol 
ID3760734 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand+ 
Start bp1102542 
End bp1103198 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content43% 
IMG OID637785745 
Productdihydropteridine reductase 
Protein accessionYP_391293 
Protein GI78485368 
COG category[C] Energy production and conversion 
COG ID[COG0778] Nitroreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.0405411 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCTAA CTGAAATATT AAACACACGT TACGCAACGA AAAAATTTGA TCCAAACCAA 
CGTATTACTG AGGAGCAATT TGCGCAAATT AAAGCGTTAT TGCATTTAAG TCCGTCGTCG 
GTCAATTCTC AACCTTGGCA CTTTATTATT GCGGATTCGG CGGAAGGCAA AGCTCGTATT 
GCAAAAGGTG CTGAAGGAGC GTATGCGGCA AATAACCCGA AGATTTTAGC GGCCTCGCAT 
GTGGTGTTAT TTTGCGCTAA GACAGACATT AGTGATGCCT ATTTGGAGAA AATAACCGAA 
CAAGAAGATA TTGATGGACG ATTTCCAAAG CCAGAAGGTA AAGAGATGGC TTTAAAAGTA 
CGTGGTTTTT ATGCCGATCT GCATCGAAAA GAACGGGATG ATGTGGCGTG TTGGACACAA 
AACCAAGTGT ACCTGAATAT AGGGAACTTA TTGTTAGGAG CAGCGGCGCT TGGAGTTGAC 
GCCGTGCCGA TTGAAGGCGT AGATATCGAC GTGTTGAACC AAGAGTTTAA CCTAACGGAT 
TTAGGCTTTA CGGCTGTAGC GGTGGTGGCA TTAGGTTATC GTGCCGAAGA CGATTTTAAT 
GCGGCATTAC CCAAGTCCAG ATTTCCAGAA GCAGAGATTT TTACTTTCTT AAAATAA
 
Protein sequence
MNLTEILNTR YATKKFDPNQ RITEEQFAQI KALLHLSPSS VNSQPWHFII ADSAEGKARI 
AKGAEGAYAA NNPKILAASH VVLFCAKTDI SDAYLEKITE QEDIDGRFPK PEGKEMALKV 
RGFYADLHRK ERDDVACWTQ NQVYLNIGNL LLGAAALGVD AVPIEGVDID VLNQEFNLTD 
LGFTAVAVVA LGYRAEDDFN AALPKSRFPE AEIFTFLK