| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1015 |
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| Symbol | |
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| ID | 3760501 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | - |
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| Start bp | 1093746 |
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| End bp | 1094927 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637785736 |
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| Product | DEAD/DEAH box helicase-like |
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| Protein accession | YP_391284 |
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| Protein GI | 78485359 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.100482 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCATTTT CAAAACTCGG ATTATCAGAC CCGATTGTCA AAGCTGTTTC CGAGCGAGGC
TACGACGCGC CTACCGACAT TCAGAAACAG GCCATTCCCA TCATCTTATC GGGCAAAGAC
CTCATGGCCG CCGCCCAAAC GGGCACGGGG AAAACCGCCA GTTTTGTCTT ACCGCTGTTG
GAAAAATTGA ACACTGACAA TGCCATCCGT GGGCGATCCA TCCGCGCCCT CATCCTCGTA
CCGACGCGTG AGCTGGCCAT GCAAGTTGAA ACCAATGTGG TTGACTATGC CAAACATTTA
AACCTCAGTT CAATGGCAGC TTATGGCGGC ACAGACATCG ACGCGCAAAA ACAACGCCTT
ATGCAAGGCA TCGACATTCT CGTCGCCACC CCTGGGAGAT TGTTGGACTT AGCCTATCAA
CGCGCCTTGT TTTTTGATGA TTTGGAATTT CTGGTGTTGG ATGAAGCCGA CAAAATGCTC
GATATGGGCT TTATTGACGA CCTTTATAAA ATCACCGATC GTCTGCCCCA CCAACGCCAA
AGCTTACTGT TTTCCGCCAC GTTGACAGAA GCTGTACGCT ATTTAGCCGC CGACACCGTA
TCGGACGATG CGACTGAAAT TTCTATTTCC CCGCAAAATA AAACCACGCC GAAAATAAAA
CAATGGCTGA TTACCGTCGA CAAAGACACC AAGTCCGCCC TATTGAGTCA CTTGATTAAC
GAACAACACT GGGACCAGGC GCTTATTTTT GTTGAGAAAA AACATTCCGC CGCCAAACTC
GTTGAACAAC TTGGCAAGCG AGGCATTATC GCCGATTCCA TTCACAGTGG TCGAAGCCAA
GCGGCGCGAG AACAGGTTTT GTCGGAGTTT AAATCAGGGA AATTGAAATT TTTAATCGCC
ACCGGCATTG CCGCCCGAGG GATTGATATA GACAATCTTA GCCGCGTCGT AAACTACGAC
CTGCCTTACC CTGCAGAAGA ATACATTCAC CGAATCGGTC GCACAGGCCG CGCTGGAGCC
ACCGGTGAAG CCCTTTCTTT GGTCTCGAAA GATGATTTCA AAAACCTTTG CGCCATTGAA
AGTCTTTTAG GGCACCTTAT TGAACGCATC GAAATCGCAG GCTTTCCGGT TAAAAAGATC
GTTCCAGTTT CCATTTTGAA TTATCGAAGC AAGCAGAAGT AA
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| Protein sequence | MSFSKLGLSD PIVKAVSERG YDAPTDIQKQ AIPIILSGKD LMAAAQTGTG KTASFVLPLL
EKLNTDNAIR GRSIRALILV PTRELAMQVE TNVVDYAKHL NLSSMAAYGG TDIDAQKQRL
MQGIDILVAT PGRLLDLAYQ RALFFDDLEF LVLDEADKML DMGFIDDLYK ITDRLPHQRQ
SLLFSATLTE AVRYLAADTV SDDATEISIS PQNKTTPKIK QWLITVDKDT KSALLSHLIN
EQHWDQALIF VEKKHSAAKL VEQLGKRGII ADSIHSGRSQ AAREQVLSEF KSGKLKFLIA
TGIAARGIDI DNLSRVVNYD LPYPAEEYIH RIGRTGRAGA TGEALSLVSK DDFKNLCAIE
SLLGHLIERI EIAGFPVKKI VPVSILNYRS KQK
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