Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_1000 |
Symbol | |
ID | 3760486 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | + |
Start bp | 1076977 |
End bp | 1077474 |
Gene Length | 498 bp |
Protein Length | 165 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637785721 |
Product | NUDIX hydrolase |
Protein accession | YP_391269 |
Protein GI | 78485344 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1051] ADP-ribose pyrophosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00000136038 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGATTGATG CAGATGGGTA TCGCCCCAAT GTAGGTATCA TTATTGTCAA TAAGGAAGGT AAACTTTTTT GGGGAAAACG CCTGTACCAA GATGCTTGGC AGTTTCCCCA GGGGGGCGTA CGTGAGAATG AAACGCCTCA ACAAGCTGTT TTTCGAGAGC TGAAAGAAGA AGTCGGGCTG GAGCCTTCAG ATGTCAGAGT TTTGGGGCGC ACCAAAGACT GGCTGACGTA TGACCTACCA AAACATTTGA TTCGACACTA TAGTCAGCCA GTCTGCATCG GTCAAAAGCA GATTTGGTTT TTGCTGGGCA TGTTAAGTGA TGATGAAAAG ATTAATTTAA ATACACACGA AACTCCGGAG TTTGAAGGGT GGAGCTGGGT AGATTACTGG GTGCCGGTTC AAAATGTGGT TGAATTTAAA CAATCCGTCT ATCACCAAGC CTTAACCGAG CTTGAAACCC ATTTGCATAA ATTCTGGACC AAAGAACACG TCGGATAA
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Protein sequence | MIDADGYRPN VGIIIVNKEG KLFWGKRLYQ DAWQFPQGGV RENETPQQAV FRELKEEVGL EPSDVRVLGR TKDWLTYDLP KHLIRHYSQP VCIGQKQIWF LLGMLSDDEK INLNTHETPE FEGWSWVDYW VPVQNVVEFK QSVYHQALTE LETHLHKFWT KEHVG
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