Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_0998 |
Symbol | |
ID | 3762176 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | + |
Start bp | 1074589 |
End bp | 1075968 |
Gene Length | 1380 bp |
Protein Length | 459 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637785719 |
Product | signal recognition particle protein |
Protein accession | YP_391267 |
Protein GI | 78485342 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0541] Signal recognition particle GTPase |
TIGRFAM ID | [TIGR00959] signal recognition particle protein |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTGATA ATTTATCGGA TCGTTTAGCC AAATCGTTTA AAACGATTAC CGGGCAAGGA CGCTTAACAG AATCTAATAT TAAAGATGCG CTGCGAGATG TTCGACGCGC ATTACTGGAA GCCGATGTGG CTTTGCCGGT TGTTAAATCC TTTATTGACA AGGTTCAGGA AAGAGCCATC GGTCAAGAAG TTTCCACCAG TTTAAATCCG GGCCAGGCCT TTATTAAAAT TGTGCGCGAG CAGCTGACGG AGATCATGGG GCAAGAAGCC GAGCCTTTGA ACTTCAATGT TGAACCGCCG GCCATTATTA TGGTTGCCGG GTTGCAAGGG GCGGGTAAAA CCACCTCGGT CGGTAAACTG GCGCGTTGGT TAAAAGAACG CGAAAAGAAA AAAGTCATGG TGGTTTCGGC CGACGTTTAT CGCCCAGCGG CGATCAAGCA GTTGGAAACA CTGGCCGAAC AAGTTGACGT GAGTTTTTAC CCTTCAACGG CGGATGAAGA TCCGGTTGAT ATTGCTAAAA AGGCCCATGC GGAAGCGAAG AAACAGTTTG TTGATGTATT GATTCTGGAT ACGGCAGGGC GTTTGCACGT CGATGAAGAC ATGATGCAAG AAGTGCAGCG CTTGCACACC GCAATCAAAC CGGTTGAAAC GTTGTTTGTG GTCGATGCTA TGACCGGGCA AGATGCCGCT AATACGGCCA AAGCCTTTAA TGATGCGTTG CCGTTAACCG GGGTCATTTT AACCAAAACC GACGGGGATG CTCGTGGCGG TGCGGCGTTA TCCATTCGTG AAATTACCGG TAAGCCGATT AAGTTTATCG GGGCGGGTGA AAAAACCGAG GCTTTAGAAT CGTTCCACCC GGATCGTATG GCGGGTCGCA TTTTAGGAAT GGGCGATGTC CTGAGTTTGA TTGAAGACGC GGAAAGCAAA ATCGATCAAA AGAAAGCGCA GAAATTCGCC AAGAAAATGC AAAAATCCGG TCAGTTTGAC TTGGAAGATT TCCTTGAGCA GCTTCAGCAA ATCAACAGCA TGGGCGGTGT TGGCGGTTTG ATGGGCAAAA TGCCGGGCAT GAATCAAATG AAAGGTCAAA TCAATAACGA GGCCGTTGAA AAAGATTTTA AACGCCTGGA GGCGATTATC TATTCCATGA CGCGTCAGGA AAGAGCGCAT CCGGCCATCA TCAAAGGGTC CCGTAAAAAG CGTATTGCCA ATGGGTCGGG CACCTCGGTG CAAGACATCA ATAAGCTGAT GAAGCAGTTT ACTCAAATGC AGAAGATGAT GAAGAAAGTC TCGAAAGGCG GCATGAAAAA CATGATGCGT GGTATGGCAG GGAAAATGCC ACCTGGAATG GGCGGCATGT TACCACCTGG CATGCGTTAA
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Protein sequence | MFDNLSDRLA KSFKTITGQG RLTESNIKDA LRDVRRALLE ADVALPVVKS FIDKVQERAI GQEVSTSLNP GQAFIKIVRE QLTEIMGQEA EPLNFNVEPP AIIMVAGLQG AGKTTSVGKL ARWLKEREKK KVMVVSADVY RPAAIKQLET LAEQVDVSFY PSTADEDPVD IAKKAHAEAK KQFVDVLILD TAGRLHVDED MMQEVQRLHT AIKPVETLFV VDAMTGQDAA NTAKAFNDAL PLTGVILTKT DGDARGGAAL SIREITGKPI KFIGAGEKTE ALESFHPDRM AGRILGMGDV LSLIEDAESK IDQKKAQKFA KKMQKSGQFD LEDFLEQLQQ INSMGGVGGL MGKMPGMNQM KGQINNEAVE KDFKRLEAII YSMTRQERAH PAIIKGSRKK RIANGSGTSV QDINKLMKQF TQMQKMMKKV SKGGMKNMMR GMAGKMPPGM GGMLPPGMR
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