Gene Tcr_0993 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0993 
Symbol 
ID3762171 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand+ 
Start bp1069205 
End bp1069864 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content41% 
IMG OID637785714 
Productcytochrome c1 
Protein accessionYP_391262 
Protein GI78485337 
COG category[C] Energy production and conversion 
COG ID[COG2857] Cytochrome c1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.697791 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAT TTCTAACCAC GTTAACGATT TTAATGATGC TTCCTCTAAC TGGTTTTGCT 
GCAGGGGGCT ACAACATTGA ATTAGAAAAA GCCAATAACA GTTTGGAAGA TAAAGATTCT 
TTGAAAAGAG GGGCGATTTT ATTTTCCGAG TACTGTATGG CATGTCACTC GCTTAAATAC 
ATGCGATATA ACCGTATTGC ACGTGATTTA GGTTGGGAAG ATGAGGATGT TGTTGCTTAT 
ATGACCTATA ACCAAAACAA GCCTGTCGAT ACCGTGATGA CTCGTATGCT GCCAGGAGTG 
GATAAAGAAG TGTTGGGAAC GCAAGTTCCA GACCTTTCTT TAATGGCCCG TTTAAAAGGT 
ACGGACTATA TCTATAGTTT CTTAAGAGGC TATGAAGTCG ATGAAAAGAC CGGTGAGTGG 
GACAATAAAC TGCTTCACGG CACGTCTATG CCGAATGTGT TGGAAGGTAT GCAACGTCAT 
ATGACAGCAG AAGAGTATGA TCAAGCAACG CGCGATATCA CTAACTTCTT AGAATATGTT 
GGCGAGCCGG CTAAGTTGAA ACGTCATGAC TTGGGCTGGA AAGTATTGCT CTTCTTGTTG 
GTGTTGATTG TGATCAGCTA CTTGCTGAAA AAAGAATATT GGCGAGATGT GAAGCACTGA
 
Protein sequence
MKKFLTTLTI LMMLPLTGFA AGGYNIELEK ANNSLEDKDS LKRGAILFSE YCMACHSLKY 
MRYNRIARDL GWEDEDVVAY MTYNQNKPVD TVMTRMLPGV DKEVLGTQVP DLSLMARLKG 
TDYIYSFLRG YEVDEKTGEW DNKLLHGTSM PNVLEGMQRH MTAEEYDQAT RDITNFLEYV 
GEPAKLKRHD LGWKVLLFLL VLIVISYLLK KEYWRDVKH