Gene Tcr_0990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0990 
Symbol 
ID3762168 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1066334 
End bp1067074 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content45% 
IMG OID637785711 
Producthypothetical protein 
Protein accessionYP_391259 
Protein GI78485334 
COG category[S] Function unknown 
COG ID[COG0327] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00486] dinuclear metal center protein, YbgI/SA1388 family 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACGA TGGAATTGGT CAAATACTTA GATGATTTTT TAGAAGCGAC CACCTTTAAG 
GATTATGCGC CTAATGGGCT GCAGGTGGAA GGCAAGTCGG ACATCACTAA AATTGTGACC
GGAGTCACTG CGTGTCAAGC TTTGATTGAT GCCGCCATTG CGGAAAAAGC CGATGCGATT
ATCGTTCATC ACGGGTATTT CTGGAAAAAT GAACCTGTAA CGATCACCGG CATGAAACAA
AAGCGTATTC GTTCTTTGTT AGAGAGTGAA ATCAGTCTAT TAGGCTATCA TTTACCACTC
GATGCTCATC CAACATTAGG CAACAATGCC ATGTTAGGTG AGTTGTGGTC GTTAGAAGAC
ATCACTCCGG AACCAGGGTT GGTTCGGTTA GGGCGTCTAT CGTCTCCTGT GTCGATTGAC
ACGTTTATTG AATCTGTTGG AAACAGTTTG AACCGGATGC CTTTGCACTT GCCTGGCGGC
CCATCAGAAG TTGAAACCGT TGCCTGGTGC AGTGGCGGGG CGCAAGGTTA CATTGAAAAA
GCGATTGAAT GGGGCGCGGA TGTTTATATT AGTGGTGAAG TTTCAGAGCA AACCACGCAT
CAAGCACTCG AAAACCAAAT TCATTACTTG GCGGCCGGTC ATCATGCCAC TGAAAGGCTT
GGAGTTAAAG CGCTAGGCGA GCATTTAGCT CAAGCGTTTG ATTTAGAAGT TGTTTTTATT
GATATTGAAA ATCCGGTGTA A
 
Protein sequence
MKTMELVKYL DDFLEATTFK DYAPNGLQVE GKSDITKIVT GVTACQALID AAIAEKADAI 
IVHHGYFWKN EPVTITGMKQ KRIRSLLESE ISLLGYHLPL DAHPTLGNNA MLGELWSLED
ITPEPGLVRL GRLSSPVSID TFIESVGNSL NRMPLHLPGG PSEVETVAWC SGGAQGYIEK
AIEWGADVYI SGEVSEQTTH QALENQIHYL AAGHHATERL GVKALGEHLA QAFDLEVVFI
DIENPV